Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2p15 EZT Estrogen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2p15 EZTEstrogen receptor / 1.526
3uud ESTEstrogen receptor / 1.048
1gwr ESTEstrogen receptor / 0.983
2b1z 17MEstrogen receptor / 0.972
3oll ESTEstrogen receptor beta / 0.959
2j7x ESTEstrogen receptor beta / 0.843
2pog WSTEstrogen receptor / 0.826
3ols ESTEstrogen receptor beta / 0.818
5hyr ESTEstrogen receptor / 0.811
2yat EEUEstrogen receptor / 0.738
4ofu DHTAndrogen receptor / 0.725
1g50 ESTEstrogen receptor / 0.715
2pit DHTAndrogen receptor / 0.706
2fai 459Estrogen receptor / 0.705
1t73 DHTAndrogen receptor / 0.704
1t79 DHTAndrogen receptor / 0.704
2qe4 JJ3Estrogen receptor / 0.695
1t65 DHTAndrogen receptor / 0.689
1t7f DHTAndrogen receptor / 0.688
2pio DHTAndrogen receptor / 0.688
2pip DHTAndrogen receptor / 0.672
4e5f 0N7Polymerase acidic protein / 0.665
2osc MUHAngiopoietin-1 receptor 2.7.10.1 0.660
2piv DHTAndrogen receptor / 0.656
4qrc 0LIFibroblast growth factor receptor 4 2.7.10.1 0.656
4oez DHTAndrogen receptor / 0.655
2z4b DC8Estrogen receptor beta / 0.654