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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ozg COA GCN5-related N-acetyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2ozg COAGCN5-related N-acetyltransferase / 1.236
4r3k COAN-alpha-acetyltransferase 2.3.1 0.765
4qvt ACOAcetyltransferase YpeA 2.3.1 0.751
1cjw COTSerotonin N-acetyltransferase / 0.731
3dr8 ACOL-methionine sulfoximine/L-methionine sulfone acetyltransferase / 0.691
1ib1 COTSerotonin N-acetyltransferase / 0.687
1s5k COAAminoglycoside N(6')-acetyltransferase type 1 / 0.683
4crz ACOPanD regulatory factor / 0.682
4kub COAUncharacterized protein / 0.682
3pgp ACOUncharacterized protein / 0.681
1l0c COTSerotonin N-acetyltransferase / 0.679
3r1k COAN-acetyltransferase Eis / 0.673
4cry ACOPanD regulatory factor / 0.668
1s60 COAAminoglycoside N(6')-acetyltransferase type 1 / 0.666
2jdc CAOProbable acetyltransferase / 0.657
1s3z COAAminoglycoside N(6')-acetyltransferase type 1 / 0.656
4ava ACOAcetyltransferase Pat 2.3.1 0.653
4gs4 ACOAlpha-tubulin N-acetyltransferase 1 / 0.653
2bue COAAAC(6')-Ib / 0.652
1bo4 COAAminoglycoside-(3)-N-acetyltransferase / 0.650
4h6z ACOAlpha-tubulin N-acetyltransferase 1 / 0.650