Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ohh FMN Type A flavoprotein FprA 1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2ohh FMNType A flavoprotein FprA 1 1.268
2ohj FMNType A flavoprotein FprA 1 0.973
1ych FMNNitric oxide reductase 1 0.944
2ohi FMNType A flavoprotein FprA 1 0.933
2q9u FMNA-type flavoprotein / 0.914
1ycf FMNNitric oxide reductase 1 0.909
1ycg FMNNitric oxide reductase 1 0.887
2hpv FMNFMN-dependent NADH-azoreductase 1.7 0.790
2fcr FMNFlavodoxin / 0.784
4bmo FMNProtein NrdI / 0.777
1yob FMNFlavodoxin 2 / 0.776
1czn FMNFlavodoxin / 0.768
4m0c FMNFMN-dependent NADH-azoreductase 1 / 0.766
2v5u FMNFlavodoxin / 0.763
4n82 FMNRibonucleotide reductase (NrdI family protein), putative / 0.756
2b3d FADModulator of drug activity B / 0.749
3ojx FMNNADPH--cytochrome P450 reductase / 0.749
1ahn FMNFlavodoxin 1 / 0.747
1azl FMNFlavodoxin / 0.741
1ofv FMNFlavodoxin / 0.732
4bmp FMNProtein NrdI / 0.732
1zwl FMNNAD(P)H dehydrogenase (quinone) 1.6.5.2 0.731
3qe2 FMNNADPH--cytochrome P450 reductase / 0.731
3f6s FMNFlavodoxin / 0.730
4oxx FMNCindoxin / 0.730
1akr FMNFlavodoxin / 0.728
3esz FMNFlavodoxin / 0.727
3n3a FMNProtein NrdI / 0.719
1qbg FADNAD(P)H dehydrogenase [quinone] 1 1.6.5.2 0.716
2fx2 FMNFlavodoxin / 0.715
2v5v FMNFlavodoxin / 0.714
3n3b FMNProtein NrdI / 0.714
3ojw FMNNADPH--cytochrome P450 reductase / 0.713
3qfr FMNNADPH--cytochrome P450 reductase / 0.713
2qmy FADRibosyldihydronicotinamide dehydrogenase [quinone] / 0.712
1j9g FMNFlavodoxin / 0.711
3klb FMNUncharacterized protein / 0.711
1j8q FMNFlavodoxin / 0.705
1amo FMNNADPH--cytochrome P450 reductase / 0.703
2bn4 FMNNADPH--cytochrome P450 reductase / 0.703
3n39 FMNProtein NrdI / 0.702
4y7c FMNNADPH--cytochrome P450 reductase / 0.701
1c7f FMNFlavodoxin / 0.699
3in6 FMNUncharacterized protein / 0.696
4qoe FADRibosyldihydronicotinamide dehydrogenase [quinone] / 0.696
1oyc FMNNADPH dehydrogenase 1 1.6.99.1 0.695
3gfd FMNIodotyrosine deiodinase 1 1.21.1.1 0.694
3lcm FADPutative oxidoreductase / 0.694
5fx2 FMNFlavodoxin / 0.694
4a3u FMNNADH:flavin oxidoreductase/NADH oxidase / 0.692
4r81 FMNPredicted NADH dehydrogenase / 0.690
1akw FMNFlavodoxin / 0.688
4j8p FMNFlavodoxin / 0.688
4zvn FADRibosyldihydronicotinamide dehydrogenase [quinone] / 0.687
5xr8 FMNCannabinoid receptor 1 / 0.686
2bf4 FMNNADPH--cytochrome P450 reductase / 0.685
3pl8 FADPyranose 2-oxidase / 0.685
1t5b FMNFMN-dependent NADH-azoreductase / 0.684
3esy FMNFlavodoxin / 0.683
1tll FMNNitric oxide synthase, brain 1.14.13.39 0.681
4aut FADDecaprenylphosphoryl-beta-D-ribose oxidase / 0.681
4f4q FADDecaprenylphosphoryl-beta-D-ribose oxidase / 0.681
2ign FADPyranose 2-oxidase / 0.680
3fcj FADNitroalkane oxidase 1.7.3.1 0.678
5cpm FNRNADH:flavin oxidoreductase / 0.676
1siq FADGlutaryl-CoA dehydrogenase, mitochondrial 1.3.8.6 0.675
3b03 VNRIsopentenyl-diphosphate delta-isomerase / 0.675
1buc FADAcyl-CoA dehydrogenase, short-chain specific 1.3.8.1 0.674
1aku FMNFlavodoxin / 0.673
3qe2 FADNADPH--cytochrome P450 reductase / 0.672
3qfc FADNADPH--cytochrome P450 reductase / 0.672
3lb8 FADPutidaredoxin reductase 1.18.1.5 0.671
3n19 FNRXenobiotic reductase / 0.671
1ja1 FMNNADPH--cytochrome P450 reductase / 0.669
3mkh FADNitroalkane oxidase / 0.669
1xyv FMNFlavodoxin / 0.668
3tjl FMNNADPH dehydrogenase / 0.666
4zvl FADRibosyldihydronicotinamide dehydrogenase [quinone] / 0.666
2c12 FADNitroalkane oxidase 1.7.3.1 0.664
4df2 FMNNADPH dehydrogenase / 0.664
3bnk FMNFlavoredoxin / 0.663
2w5u FMNFlavodoxin / 0.662
4n65 FMNFMN-dependent NADH-azoreductase 1 / 0.662
1rx0 FADIsobutyryl-CoA dehydrogenase, mitochondrial 1.3.99 0.661
3zho FMNNAD(P)H dehydrogenase (quinone) / 0.661
3k4c FADPyranose 2-oxidase / 0.660
2abb FMNPentaerythritol tetranitrate reductase / 0.659
4iv6 FDAIsovaleryl-CoA dehydrogenase / 0.658
2d29 FADAcyl-CoA dehydrogenase / 0.657
1ja0 FMNNADPH--cytochrome P450 reductase / 0.656
4yao FMNNADPH--cytochrome P450 reductase / 0.656
3kap FMNFlavodoxin / 0.654
4cw5 FMNDfnA / 0.654
4mih FADPyranose 2-oxidase 1.1.3.10 0.654
5tgz FMNCannabinoid receptor 1 / 0.653
3zc3 FADFerredoxin--NADP reductase 1.18.1.2 0.651
1vhn FMNtRNA-dihydrouridine synthase / 0.650