sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2ob0 | ACO | N-alpha-acetyltransferase 50 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2ob0 | ACO | N-alpha-acetyltransferase 50 | / | 1.360 | |
| 2psw | COA | N-alpha-acetyltransferase 50 | / | 0.971 | |
| 4ag7 | COA | Glucosamine 6-phosphate N-acetyltransferase | / | 0.802 | |
| 4u9v | ACO | N-alpha-acetyltransferase 40 | 2.3.1 | 0.798 | |
| 4hkf | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.776 | |
| 2jdc | CAO | Probable acetyltransferase | / | 0.770 | |
| 2bsw | CAO | Probable acetyltransferase | / | 0.759 | |
| 4xnh | ACO | N-terminal acetyltransferase A complex subunit NAT5 | 2.3.1 | 0.753 | |
| 1s5k | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.747 | |
| 1b87 | ACO | Aac(6')-Ii protein | / | 0.739 | |
| 1p0h | ACO | Mycothiol acetyltransferase | 2.3.1.189 | 0.736 | |
| 5kgp | ACO | Predicted acetyltransferase | / | 0.736 | |
| 1n71 | COA | Aac(6')-Ii protein | / | 0.733 | |
| 4xpd | ACO | N-terminal acetyltransferase A complex subunit NAT5 | 2.3.1 | 0.733 | |
| 3tfy | COA | N-alpha-acetyltransferase 50 | 2.3.1 | 0.730 | |
| 5kf9 | ACO | Predicted acetyltransferase | / | 0.726 | |
| 1ghe | ACO | Acetyltransferase | 2.3.1 | 0.723 | |
| 4crz | ACO | PanD regulatory factor | / | 0.720 | |
| 1j4j | ACO | Acetyltransferase | 2.3.1 | 0.711 | |
| 3to6 | LYS_CMC | Histone acetyltransferase ESA1 | / | 0.710 | |
| 2jdd | ACO | Probable acetyltransferase | / | 0.708 | |
| 4mxe | ACO | N-acetyltransferase ESCO1 | 2.3.1 | 0.705 | |
| 4r3k | COA | N-alpha-acetyltransferase | 2.3.1 | 0.705 | |
| 3pgp | ACO | Uncharacterized protein | / | 0.702 | |
| 5h86 | BCO | Histone acetyltransferase KAT2A | 2.3.1.48 | 0.697 | |
| 4ua3 | COA | N-alpha-acetyltransferase 40 | 2.3.1 | 0.696 | |
| 4cry | ACO | PanD regulatory factor | / | 0.695 | |
| 2vxk | COA | Glucosamine 6-phosphate acetyltransferase, putative | / | 0.691 | |
| 3bj7 | COA | Diamine acetyltransferase 1 | / | 0.688 | |
| 4cs0 | ACO | PanD regulatory factor | / | 0.688 | |
| 2b58 | COA | Diamine acetyltransferase 1 | / | 0.686 | |
| 2a4n | COA | Aac(6')-Ii protein | / | 0.685 | |
| 5h84 | 1VU | Histone acetyltransferase KAT2A | 2.3.1.48 | 0.683 | |
| 1s3z | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.681 | |
| 1wwz | ACO | Uncharacterized protein | / | 0.681 | |
| 3f0a | ACO | Spermidine N(1)-acetyltransferase | / | 0.679 | |
| 2c27 | ACO | Mycothiol acetyltransferase | 2.3.1.189 | 0.677 | |
| 5c88 | COA | N-alpha-acetyltransferase | / | 0.677 | |
| 2x7b | COA | N-alpha-acetyltransferase | 2.3.1 | 0.675 | |
| 4lx9 | ACO | N-alpha-acetyltransferase | 2.3.1 | 0.673 | |
| 4zm6 | ACO | N-acetyl-beta-D glucosaminidase | / | 0.673 | |
| 1p0h | COA | Mycothiol acetyltransferase | 2.3.1.189 | 0.670 | |
| 2zpa | ACO | tRNA(Met) cytidine acetyltransferase TmcA | / | 0.670 | |
| 3s6f | COA | Uncharacterized protein | / | 0.669 | |
| 3vwe | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.666 | |
| 2zw4 | COA | Bleomycin acetyltransferase | / | 0.663 | |
| 5kf2 | ACO | Predicted acetyltransferase | / | 0.661 | |
| 5kgj | ACO | Predicted acetyltransferase | / | 0.661 | |
| 5kgh | ACO | Predicted acetyltransferase | / | 0.660 | |
| 5kf8 | ACO | Predicted acetyltransferase | / | 0.658 | |
| 2ou2 | ACO | Histone acetyltransferase KAT5 | / | 0.657 | |
| 2prb | COA | Aminoglycoside 6-N-acetyltransferase type Ib11 | / | 0.652 | |
| 2vqy | ACO | AAC(6')-Ib | / | 0.650 |