Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2o8b | ADP | DNA mismatch repair protein Msh2 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2o8b | ADP | DNA mismatch repair protein Msh2 | / | 1.035 | |
| 1wbb | ADP | DNA mismatch repair protein MutS | / | 0.949 | |
| 2qen | ADP | Walker-Type ATPase | / | 0.833 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.827 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.827 | |
| 1bmf | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.821 | |
| 1bmf | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.821 | |
| 1sdm | ADP | Kinesin heavy chain-like protein | / | 0.814 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.810 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.810 | |
| 2jj2 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.797 | |
| 2jj2 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.797 | |
| 1bof | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.793 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.791 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.789 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.789 | |
| 2gks | ADP | Probable bifunctional SAT/APS kinase | 2.7.1.25 | 0.787 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.785 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.784 | |
| 1w1w | AGS | Structural maintenance of chromosomes protein 1 | / | 0.782 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.782 | |
| 5irn | ADP | Nucleotide binding oligomerization domain containing 2 | / | 0.782 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.781 | |
| 2v7q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.781 | |
| 2xae | ADP | Kinesin-like protein KIF11 | / | 0.780 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.780 | |
| 4lrw | GDP | GTPase KRas | / | 0.780 | |
| 4pk4 | ADP | Unconventional myosin-VI | / | 0.780 | |
| 1xmv | ADP | Protein RecA | / | 0.777 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.777 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.776 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.776 | |
| 1xnj | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 | 2.7.1.25 | 0.775 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.775 | |
| 4xsg | GSP | Transforming protein RhoA | / | 0.775 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.774 | |
| 3vx4 | ATP | Putative ABC transporter, ATP-binding protein ComA | / | 0.774 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.768 | |
| 3cob | ADP | Kinesin heavy chain-like protein | / | 0.767 | |
| 4hse | ADP | Chaperone protein ClpB | / | 0.765 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.765 | |
| 4pjk | ADP | Myosin-2 heavy chain | / | 0.765 | |
| 4ag5 | ADP | Type IV secretory pathway VirB4 components-like protein | / | 0.764 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.764 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.762 | |
| 4lpk | GDP | GTPase KRas | / | 0.762 | |
| 2zfi | ADP | Kinesin-like protein KIF1A | / | 0.761 | |
| 3thy | ADP | DNA mismatch repair protein Msh2 | / | 0.759 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.759 | |
| 2fna | ADP | Uncharacterized protein | / | 0.758 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.757 | |
| 4ap0 | ADP | Kinesin-like protein KIF11 | / | 0.757 | |
| 4luc | GDP | GTPase KRas | / | 0.757 | |
| 1e1q | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.756 | |
| 1fp6 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.756 | |
| 1w0k | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.756 | |
| 1w0k | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.756 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.755 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 0.754 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.753 | |
| 5ftc | ADP | TPR domain protein | / | 0.753 | |
| 1sq5 | ADP | Pantothenate kinase | 2.7.1.33 | 0.752 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.752 | |
| 1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.751 | |
| 2cl6 | CAG | GTPase HRas | / | 0.751 | |
| 3k1j | ADP | ATP-dependent protease Lon | / | 0.751 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.750 | |
| 3qbv | GDP | Cell division control protein 42 homolog | / | 0.750 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.750 | |
| 3fwy | ADP | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | / | 0.749 | |
| 4l9s | GDP | GTPase HRas | / | 0.749 | |
| 3l9h | ADP | Kinesin-like protein KIF11 | / | 0.748 | |
| 4db1 | ANP | Myosin-7 | / | 0.746 | |
| 5bn3 | ADP | V-type ATP synthase alpha chain | / | 0.746 | |
| 5bn3 | ADP | NEQ263 | / | 0.746 | |
| 2zts | ADP | Uncharacterized protein | / | 0.745 | |
| 3tqc | ADP | Pantothenate kinase | / | 0.745 | |
| 4b7b | ADP | Kinesin-like protein KIF11 | / | 0.745 | |
| 1z0f | GDP | Ras-related protein Rab-14 | / | 0.744 | |
| 4ys0 | ADP | Protein translocase subunit SecA | / | 0.744 | |
| 5bn4 | ANP | V-type ATP synthase alpha chain | / | 0.744 | |
| 4k81 | GTP | GTPase HRas | / | 0.743 | |
| 4lv6 | GDP | GTPase KRas | / | 0.743 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.742 | |
| 1mmg | AGS | Myosin-2 heavy chain | / | 0.740 | |
| 2xau | ADP | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 3.6.4.13 | 0.740 | |
| 4cvl | ACP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.740 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.739 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.738 | |
| 3zfd | ANP | Chromosome-associated kinesin KIF4 | / | 0.738 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.738 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 0.737 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.736 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.735 | |
| 4jsy | GTP | Metallophosphoesterase | / | 0.733 | |
| 4obe | GDP | GTPase KRas | / | 0.733 | |
| 4r9u | ANP | Vitamin B12 import ATP-binding protein BtuD | / | 0.733 | |
| 1i4l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.732 | |
| 4epw | GDP | GTPase KRas | / | 0.732 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.732 | |
| 3tif | ADP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.730 | |
| 1g6o | ADP | Cag alpha | / | 0.729 | |
| 4ldj | GDP | GTPase KRas | / | 0.729 | |
| 4nh0 | ATP | ESX secretion system protein EccC | / | 0.729 | |
| 3ieu | GDP | GTPase Era | / | 0.728 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.727 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.727 | |
| 2jj1 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.726 | |
| 2jj1 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.726 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.725 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.725 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.725 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.724 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.724 | |
| 1yrs | ADP | Kinesin-like protein KIF11 | / | 0.723 | |
| 2zrj | AGS | Protein RecA | / | 0.723 | |
| 3pfi | ADP | Holliday junction ATP-dependent DNA helicase RuvB | / | 0.723 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.723 | |
| 4ylg | GDP | ADP-ribosylation factor 1, putative | / | 0.723 | |
| 2pg2 | ADP | Kinesin-like protein KIF11 | / | 0.721 | |
| 2uyi | ADP | Kinesin-like protein KIF11 | / | 0.721 | |
| 2x2r | ADP | Kinesin-like protein KIF11 | / | 0.720 | |
| 4yqf | GDP | Septin-9 | / | 0.720 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 0.719 | |
| 2fah | GDP | Phosphoenolpyruvate carboxykinase [GTP], mitochondrial | 4.1.1.32 | 0.719 | |
| 4l8g | GDP | GTPase KRas | / | 0.719 | |
| 5d3q | GDP | Dynamin-1 | 3.6.5.5 | 0.719 | |
| 1svl | ADP | Large T antigen | 3.6.4 | 0.718 | |
| 1w5t | ADP | ORC1-type DNA replication protein 2 | / | 0.718 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.718 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.718 | |
| 1e79 | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.716 | |
| 1e79 | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.716 | |
| 1rrg | GDP | ADP-ribosylation factor 1 | / | 0.716 | |
| 3cx6 | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.716 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.716 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.714 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.714 | |
| 4q02 | GDP | GTPase KRas | / | 0.714 | |
| 4ql3 | GDP | GTPase KRas | / | 0.714 | |
| 4hi0 | GDP | Urease accessory protein UreG | / | 0.713 | |
| 4q03 | GDP | GTPase KRas | / | 0.713 | |
| 4tq9 | GDP | GTPase KRas | / | 0.713 | |
| 3c41 | ANP | Amino acid ABC transporter | / | 0.712 | |
| 4epx | GDP | GTPase KRas | / | 0.712 | |
| 2ce2 | GDP | GTPase HRas | / | 0.711 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.711 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.711 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.710 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.710 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.710 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.710 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.709 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.709 | |
| 2g1q | ADP | Kinesin-like protein KIF11 | / | 0.708 | |
| 3hqd | ANP | Kinesin-like protein KIF11 | / | 0.708 | |
| 4a51 | ADP | Kinesin-like protein KIF11 | / | 0.708 | |
| 4cei | ANP | ATP-dependent helicase/deoxyribonuclease subunit B | 3.1 | 0.708 | |
| 1z6t | ADP | Apoptotic protease-activating factor 1 | / | 0.707 | |
| 3r9i | ADP | Septum site-determining protein MinD | / | 0.707 | |
| 5fl3 | ADP | Pili retraction protein PilT | / | 0.707 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.706 | |
| 3q5d | GDP | Atlastin-1 | 3.6.5 | 0.706 | |
| 4asu | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.706 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.705 | |
| 3kud | GDP | GTPase HRas | / | 0.702 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.702 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.701 | |
| 2q2z | ADP | Kinesin-like protein KIF11 | / | 0.701 | |
| 3onw | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.701 | |
| 4l9w | GNP | GTPase HRas | / | 0.701 | |
| 1l8q | ADP | Chromosomal replication initiator protein DnaA | / | 0.700 | |
| 2fl2 | ADP | Kinesin-like protein KIF11 | / | 0.700 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.700 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.700 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 0.700 | |
| 4m0l | GDP | Translation initiation factor 2 subunit gamma | / | 0.700 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.700 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.698 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.698 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.698 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.698 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.698 | |
| 4a1z | ADP | Kinesin-like protein KIF11 | / | 0.698 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.698 | |
| 1ny5 | ADP | Transcriptional regulator (NtrC family) | / | 0.697 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.697 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.697 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.697 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.696 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.696 | |
| 4wa7 | GDP | GTPase KRas | / | 0.696 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 0.695 | |
| 4dsu | GDP | GTPase KRas | / | 0.695 | |
| 4kln | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.695 | |
| 4yer | ADP | Antibiotic ABC transporter, ATP-binding protein, putative | / | 0.695 | |
| 3d8b | ADP | Fidgetin-like protein 1 | 3.6.4 | 0.694 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 0.694 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.693 | |
| 3oiw | GNP | GTPase HRas | / | 0.693 | |
| 2dwp | ACP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.692 | |
| 4o3m | ADP | Bloom syndrome protein | 3.6.4.12 | 0.692 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.692 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.692 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.691 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.691 | |
| 2i1v | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.691 | |
| 3qpv | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.691 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.690 | |
| 1njf | ADP | DNA polymerase III subunit tau | 2.7.7.7 | 0.689 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.689 | |
| 1yra | GDP | GPN-loop GTPase PAB0955 | / | 0.689 | |
| 4ma4 | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.689 | |
| 4iei | ADP | Gene 2 protein | / | 0.688 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.688 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.687 | |
| 2ql6 | ADP | Nicotinamide riboside kinase 1 | / | 0.687 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.687 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 0.687 | |
| 1q3h | ANP | Cystic fibrosis transmembrane conductance regulator | / | 0.686 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.686 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.685 | |
| 4wou | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.685 | |
| 1nbm | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.684 | |
| 3ftq | GNP | Septin-2 | / | 0.684 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 0.684 | |
| 4ww0 | ADP | ATP-dependent zinc metalloprotease FtsH | / | 0.684 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.683 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.683 | |
| 2dr3 | ADP | UPF0273 protein PH0284 | / | 0.682 | |
| 4xw5 | ATP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.682 | |
| 3q9l | ATP | Septum site-determining protein MinD | / | 0.681 | |
| 4tla | ADP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.681 | |
| 3rsl | GNP | GTPase HRas | / | 0.680 | |
| 2uz3 | TTP | Thymidine kinase | / | 0.679 | |
| 2w2v | GTP | Ras-related C3 botulinum toxin substrate 2 | / | 0.679 | |
| 3lbn | GNP | GTPase HRas | / | 0.679 | |
| 4rzu | ADP | Probable thymidylate kinase | 2.7.4.9 | 0.679 | |
| 2axn | ADP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | / | 0.678 | |
| 3l8y | GNP | GTPase HRas | / | 0.678 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.678 | |
| 3tgp | GNP | GTPase HRas | / | 0.677 | |
| 2eck | ADP | Adenylate kinase | / | 0.676 | |
| 3qcz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.676 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.676 | |
| 4ohx | ADP | Protein clpf-1 | / | 0.676 | |
| 4zir | ANP | Energy-coupling factor transporter ATP-binding protein EcfA2 | 3.6.3 | 0.676 | |
| 4zir | ANP | Energy-coupling factor transporter ATP-binding protein EcfA1 | / | 0.676 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.675 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.675 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.675 | |
| 2jiz | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.675 | |
| 3bb3 | GDP | Translocase of chloroplast 33, chloroplastic | 3.6.5 | 0.675 | |
| 3kjg | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.675 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.674 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 0.674 | |
| 3mle | ADP | ATP-dependent dethiobiotin synthetase BioD | 6.3.3.3 | 0.674 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.673 | |
| 3kji | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.673 | |
| 3ea0 | ATP | ATPase, ParA family | / | 0.672 | |
| 3pyz | ANP | Dihydrofolate synthase/folylpolyglutamate synthase | / | 0.672 | |
| 4zca | ADP | Kinesin-like protein KIF11 | / | 0.672 | |
| 5da9 | AGS | Uncharacterized protein | / | 0.672 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.671 | |
| 1q12 | ATP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.671 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.671 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.671 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.670 | |
| 2x7e | ADP | Kinesin-like protein KIF11 | / | 0.670 | |
| 4a28 | ADP | Kinesin-like protein KIF11 | / | 0.670 | |
| 4iok | ADP | Formate--tetrahydrofolate ligase | / | 0.670 | |
| 4tl6 | ANP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.670 | |
| 1e4v | AP5 | Adenylate kinase | / | 0.669 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.669 | |
| 1lfd | GNP | GTPase HRas | / | 0.667 | |
| 1n6m | ADP | Protein claret segregational | / | 0.667 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 0.667 | |
| 1w7k | ADP | Dihydrofolate synthase/folylpolyglutamate synthase | 6.3.2.12 | 0.667 | |
| 1xd9 | ADP | Nitrogenase iron protein 1 | 1.18.6.1 | 0.667 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 0.667 | |
| 2ax4 | ADP | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 | 2.7.1.25 | 0.667 | |
| 2pc9 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.667 | |
| 2phk | ATP | Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform | 2.7.11.19 | 0.667 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.666 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.666 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.665 | |
| 4dh5 | ADP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.665 | |
| 4jky | ADP | Adenylate kinase | / | 0.665 | |
| 1fnn | ADP | ORC1-type DNA replication protein | / | 0.664 | |
| 1y3a | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.664 | |
| 3oiu | GNP | GTPase HRas | / | 0.664 | |
| 4cvm | ANP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.664 | |
| 5ftf | ADP | TPR domain protein | / | 0.664 | |
| 2v7q | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.663 | |
| 2v7q | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.663 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.663 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 0.663 | |
| 3rs0 | GNP | GTPase HRas | / | 0.663 | |
| 4hut | ATP | Cob(I)yrinic acid a,c-diamide adenosyltransferase | 2.5.1.17 | 0.663 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 0.663 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 0.662 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.662 | |
| 3oiv | GNP | GTPase HRas | / | 0.662 | |
| 4dls | GNP | GTPase HRas | / | 0.662 | |
| 1w7i | ADP | Unconventional myosin-Va | / | 0.661 | |
| 3pzc | GAP | Amino acid--[acyl-carrier-protein] ligase 1 | 6.2.1.n2 | 0.661 | |
| 2xto | GDP | GTPase IMAP family member 2 | / | 0.660 | |
| 4aqk | ADP | Inositol-pentakisphosphate 2-kinase | 2.7.1.158 | 0.660 | |
| 4ihq | ADP | Conserved Archaeal protein | / | 0.660 | |
| 1e1q | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.659 | |
| 1e1q | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.659 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.659 | |
| 2vos | ADP | Folylpolyglutamate synthase | / | 0.659 | |
| 3v4f | GNP | GTPase HRas | / | 0.659 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.659 | |
| 1nly | AGS | Cag alpha | / | 0.658 | |
| 2qaj | AP5 | Adenylate kinase | / | 0.658 | |
| 2zro | ADP | Protein RecA | / | 0.658 | |
| 3aez | GDP | Pantothenate kinase | 2.7.1.33 | 0.658 | |
| 4jjz | ADP | Formate--tetrahydrofolate ligase | / | 0.658 | |
| 4r43 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.658 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.657 | |
| 1xms | ANP | Protein RecA | / | 0.657 | |
| 1okk | GCP | Signal recognition particle protein | / | 0.656 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 0.656 | |
| 4ifc | ADP | Serine/threonine-protein kinase PRP4 homolog | 2.7.11.1 | 0.656 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.655 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.655 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.655 | |
| 4ffr | ATP | Uncharacterized protein | / | 0.655 | |
| 2dft | ADP | Shikimate kinase | 2.7.1.71 | 0.654 | |
| 2whx | ADP | Genome polyprotein | 3.4.21.91 | 0.654 | |
| 3l1c | ADP | Protein claret segregational | / | 0.654 | |
| 4tlb | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.654 | |
| 4xoi | GTP | Transforming protein RhoA | / | 0.654 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.653 | |
| 1x1r | GDP | Ras-related protein M-Ras | / | 0.653 | |
| 3bxz | ADP | Protein translocase subunit SecA | / | 0.653 | |
| 3k9l | GNP | GTPase HRas | / | 0.653 | |
| 3ref | GDP | Rho family GTPase | / | 0.653 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.653 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.653 | |
| 4xeo | A5A | Alanine--tRNA ligase, cytoplasmic | / | 0.653 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.652 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.652 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.652 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.652 | |
| 4dg3 | ANP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.652 | |
| 1c0a | AMO | Aspartate--tRNA ligase | / | 0.651 | |
| 1xp8 | AGS | Protein RecA | / | 0.651 | |
| 4iay | ADP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.651 | |
| 4rz3 | ADP | Site-determining protein | / | 0.651 | |
| 1k6m | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 | 2.7.1.105 | 0.650 | |
| 1phk | ATP | Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform | 2.7.11.19 | 0.650 | |
| 2rgg | GNP | GTPase HRas | / | 0.650 | |
| 3ddc | GNP | GTPase HRas | / | 0.650 | |
| 4idn | GNP | Atlastin-1 | 3.6.5 | 0.650 |