sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2o28 | COA | Glucosamine 6-phosphate N-acetyltransferase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2o28 | COA | Glucosamine 6-phosphate N-acetyltransferase | / | 1.223 | |
| 2vez | ACO | Glucosamine 6-phosphate acetyltransferase, putative | / | 0.745 | |
| 2ozu | ACO | Histone acetyltransferase KAT6A | / | 0.704 | |
| 3exn | ACO | Probable acetyltransferase | / | 0.696 | |
| 1bob | ACO | Histone acetyltransferase type B catalytic subunit | / | 0.695 | |
| 4r3k | COA | N-alpha-acetyltransferase | 2.3.1 | 0.692 | |
| 1mjb | ACO | Histone acetyltransferase ESA1 | / | 0.690 | |
| 1kuv | CA5 | Serotonin N-acetyltransferase | / | 0.687 | |
| 1m4d | COA | Aminoglycoside 2'-N-acetyltransferase | 2.3.1 | 0.687 | |
| 2jdc | CAO | Probable acetyltransferase | / | 0.679 | |
| 5kgp | ACO | Predicted acetyltransferase | / | 0.679 | |
| 1fy7 | COA | Histone acetyltransferase ESA1 | / | 0.677 | |
| 2y0m | ACO | Histone acetyltransferase KAT8 | / | 0.674 | |
| 1qsm | ACO | Histone acetyltransferase HPA2 | / | 0.670 | |
| 1bo4 | COA | Aminoglycoside-(3)-N-acetyltransferase | / | 0.669 | |
| 1l0c | COT | Serotonin N-acetyltransferase | / | 0.667 | |
| 2cy2 | ACO | Probable acetyltransferase | / | 0.666 | |
| 2fiw | ACO | GCN5-related N-acetyltransferase:Aminotransferase, class-II | / | 0.666 | |
| 5kf1 | ACO | Predicted acetyltransferase | / | 0.665 | |
| 1ghe | ACO | Acetyltransferase | 2.3.1 | 0.663 | |
| 4r87 | COA | Spermidine N(1)-acetyltransferase | / | 0.661 | |
| 1wwz | ACO | Uncharacterized protein | / | 0.660 | |
| 3dr8 | ACO | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | / | 0.660 | |
| 1i12 | ACO | Glucosamine 6-phosphate N-acetyltransferase | / | 0.658 | |
| 2ft0 | ACO | dTDP-fucosamine acetyltransferase | / | 0.658 | |
| 2r8v | ACO | Amino-acid acetyltransferase | / | 0.658 | |
| 2b3v | ACO | Diamine acetyltransferase 1 | / | 0.656 | |
| 1mja | COA | Histone acetyltransferase ESA1 | / | 0.655 | |
| 3f8k | COA | Uncharacterized protein | / | 0.655 | |
| 1m4i | COA | Aminoglycoside 2'-N-acetyltransferase | 2.3.1 | 0.651 | |
| 2zw4 | COA | Bleomycin acetyltransferase | / | 0.650 |