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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2iki 388 Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2iki 388Aldose reductase 1.1.1.21 1.028
3lql LDTAldose reductase 1.1.1.21 0.980
2qxw LDTAldose reductase 1.1.1.21 0.976
3ld5 LDTAldose reductase 1.1.1.21 0.976
3m4h 388Aldose reductase 1.1.1.21 0.975
3lz5 LDTAldose reductase 1.1.1.21 0.958
3lbo LDTAldose reductase 1.1.1.21 0.954
2i17 LDTAldose reductase 1.1.1.21 0.943
1us0 LDTAldose reductase 1.1.1.21 0.942
2i16 LDTAldose reductase 1.1.1.21 0.942
3ghr LDTAldose reductase 1.1.1.21 0.942
3ghu LDTAldose reductase 1.1.1.21 0.931
3ght LDTAldose reductase 1.1.1.21 0.917
3ghs LDTAldose reductase 1.1.1.21 0.912
3m64 393Aldose reductase 1.1.1.21 0.821
2ikj 393Aldose reductase 1.1.1.21 0.812
2pdj 393Aldose reductase 1.1.1.21 0.801
2pzn 393Aldose reductase 1.1.1.21 0.797
3mc5 393Aldose reductase 1.1.1.21 0.796
2pdc 393Aldose reductase 1.1.1.21 0.789
2pdp 393Aldose reductase 1.1.1.21 0.780
3t42 3T4Aldose reductase 1.1.1.21 0.777
1pwl BFIAldose reductase 1.1.1.21 0.775
2pdu 393Aldose reductase 1.1.1.21 0.763
1iei ZESAldose reductase 1.1.1.21 0.744
2pdf ZSTAldose reductase 1.1.1.21 0.721
2pdb ZSTAldose reductase 1.1.1.21 0.701
2pdx ZSTAldose reductase 1.1.1.21 0.694
2inz OHPAldose reductase 1.1.1.21 0.682
4yu1 53NAldose reductase 1.1.1.21 0.679
1z89 62PAldose reductase 1.1.1.21 0.676
3s3g TLTAldose reductase 1.1.1.21 0.671
2fzd TOLAldose reductase 1.1.1.21 0.669
2pdl TOLAldose reductase 1.1.1.21 0.666
1t41 ID5Aldose reductase 1.1.1.21 0.660
2pdq 47DAldose reductase 1.1.1.21 0.656