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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2hx3 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.948
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.941
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.940
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.925
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.925
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.925
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.924
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.923
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.923
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.922
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.922
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.921
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.916
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.908
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.908
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.908
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.907
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.907
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.907
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.906
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.905
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.904
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.904
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.904
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.902
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.901
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.899
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.897
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.897
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.892
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.891
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.890
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.889
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.889
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.888
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.887
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.887
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.886
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.885
3png H4BNitric oxide synthase, brain 1.14.13.39 0.885
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.885
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.885
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.885
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.883
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.883
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.877
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.875
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.875
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.873
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.871
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.871
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.871
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.868
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.867
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.867
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.863
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.858
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.857
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.854
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.853
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.853
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.851
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.850
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.849
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.847
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.846
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.846
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.843
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.834
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.832
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.830
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.830
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.828
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.826
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.825
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.823
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.821
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.815
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.814
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.813
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.793
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.792
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.792
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.788
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.784
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.777
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.732
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.725
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.710
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.699
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.699
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.695
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.681
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.667
4e5f 0N7Polymerase acidic protein / 0.660
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.658
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.653
4gvq N4MMethenyltetrahydromethanopterin cyclohydrolase 3.5.4.27 0.652