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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2h55 DZ8 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2h55 DZ8Heat shock protein HSP 90-alpha / 1.028
1uy9 PU6Heat shock protein HSP 90-alpha / 0.865
2fwy H64Heat shock protein HSP 90-alpha / 0.858
2fwz H71Heat shock protein HSP 90-alpha / 0.856
1uyh PU0Heat shock protein HSP 90-alpha / 0.852
1uyk PUXHeat shock protein HSP 90-alpha / 0.820
1uyf PU1Heat shock protein HSP 90-alpha / 0.789
1uy8 PU5Heat shock protein HSP 90-alpha / 0.769
3qdd 94MHeat shock protein HSP 90-alpha / 0.755
4e5i 0N9Polymerase acidic protein / 0.744
4z1f H71Heat shock protein 75 kDa, mitochondrial / 0.727
1uy7 PU4Heat shock protein HSP 90-alpha / 0.721
1uye PU9Heat shock protein HSP 90-alpha / 0.704
1uyi PUZHeat shock protein HSP 90-alpha / 0.703
3o0i P54Heat shock protein HSP 90-alpha / 0.698
1uyc PU7Heat shock protein HSP 90-alpha / 0.675
3ft8 MOJHeat shock protein HSP 90-alpha / 0.667
1uyd PU8Heat shock protein HSP 90-alpha / 0.659
2yee 2ECHeat shock protein HSP 90-alpha / 0.659
3o6o 94MHeat shock protein 83 / 0.652
2cgw 3C3Serine/threonine-protein kinase Chk1 2.7.11.1 0.650