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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2gst GPS Glutathione S-transferase Mu 1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2gst GPSGlutathione S-transferase Mu 1 2.5.1.18 1.216
6gsv GPSGlutathione S-transferase Mu 1 2.5.1.18 1.045
3gst GPRGlutathione S-transferase Mu 1 2.5.1.18 1.013
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 1.010
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 1.001
1b4p GPSGlutathione S-transferase Mu 2 / 0.990
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 0.961
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.925
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.908
5fwg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.850
3gur BYGGlutathione S-transferase Mu 2 2.5.1.18 0.836
1gsu GTXGlutathione S-transferase 2 2.5.1.18 0.832
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.828
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.827
1mtc GPRGlutathione S-transferase Mu 1 2.5.1.18 0.820
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.775
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.774
3frc 0HGGlutathione S-transferase 2.5.1.18 0.741
1c72 EPYGlutathione S-transferase 2 2.5.1.18 0.720
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.720
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.676
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.672
2aaw GTXGlutathione S-transferase 2.5.1.18 0.672
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.667
2gsq GBIGlutathione S-transferase 2.5.1.18 0.663
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.663
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.657
3rt8 CWDGlutamate receptor 3 / 0.651