Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2gr3 | FAD | Ferredoxin reductase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2gr3 | FAD | Ferredoxin reductase | / | 1.525 | |
| 2gqw | FAD | Ferredoxin reductase | / | 1.487 | |
| 4h4r | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.486 | |
| 4h4t | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.467 | |
| 4h4v | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.467 | |
| 4h4x | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.467 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.452 | |
| 4h4z | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.452 | |
| 1d7y | FAD | Ferredoxin reductase | / | 1.396 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 1.391 | |
| 4h4s | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.182 | |
| 2gr1 | FAD | Ferredoxin reductase | / | 1.149 | |
| 4h4y | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.138 | |
| 4h4w | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.126 | |
| 1f3p | FAD | Ferredoxin reductase | / | 1.120 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 1.120 | |
| 2yvf | FAD | Ferredoxin reductase | / | 1.115 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.106 | |
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.099 | |
| 4h4q | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.092 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.081 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.063 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.041 | |
| 4h50 | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 1.036 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.017 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 1.000 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.989 | |
| 1gv4 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.984 | |
| 2yvj | FAD | Ferredoxin reductase | / | 0.979 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.889 | |
| 3fg2 | FAD | Putative rubredoxin reductase | / | 0.881 | |
| 1q1r | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.870 | |
| 3gd3 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.869 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.868 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.863 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.862 | |
| 4em3 | FAD | Coenzyme A disulfide reductase | / | 0.854 | |
| 4emj | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.848 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.840 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.839 | |
| 4bur | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.837 | |
| 3lb8 | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.836 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.833 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.829 | |
| 1q1w | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.819 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.810 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.810 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.807 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.804 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.804 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.803 | |
| 3lxd | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.799 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.795 | |
| 2x3n | FAD | Probable FAD-dependent monooxygenase | / | 0.793 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.784 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.783 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.782 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.776 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.774 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.772 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.770 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.769 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.766 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.763 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.762 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.760 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.758 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.757 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.757 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.756 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.756 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.755 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.754 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.754 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.753 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.753 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.752 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.751 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.750 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.747 | |
| 2wow | FAD | Trypanothione reductase | / | 0.746 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.746 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.746 | |
| 1jeh | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.745 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.745 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.745 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.745 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.745 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.744 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.742 | |
| 4opu | FDA | Conserved Archaeal protein | / | 0.742 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.741 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.741 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.741 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.739 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.737 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.736 | |
| 2x8g | FAD | Thioredoxin glutathione reductase | / | 0.736 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.734 | |
| 4icy | FAD | PgaE | / | 0.734 | |
| 4jn9 | FAD | DepH | / | 0.734 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.733 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.733 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.732 | |
| 2v3a | FAD | Rubredoxin-NAD(+) reductase | 1.18.1.1 | 0.732 | |
| 2cdu | FAD | NADH oxidase | / | 0.731 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.730 | |
| 1h6v | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.730 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.730 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.730 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.730 | |
| 2v6o | FAD | Thioredoxin glutathione reductase | / | 0.729 | |
| 4fx9 | FAD | Coenzyme A disulfide reductase | 1.8.1.14 | 0.729 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.728 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.727 | |
| 1gra | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.726 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.726 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.726 | |
| 4g6h | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.726 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.725 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.725 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.725 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.725 | |
| 3zdn | FAD | Monoamine oxidase N | 1.4.3.4 | 0.725 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.725 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.725 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.724 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.724 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.724 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.723 | |
| 4nte | FAD | DepH | / | 0.723 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.722 | |
| 4z2t | FAD | 2-hydroxybiphenyl-3-monooxygenase | / | 0.722 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.721 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.721 | |
| 4bjz | FAD | Probable salicylate monooxygenase | / | 0.721 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.720 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.720 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.719 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.718 | |
| 4x4j | FAD | Putative oxygenase | / | 0.718 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.717 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.716 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.716 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.716 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.716 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.716 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.716 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.715 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.715 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.715 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.715 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.714 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.713 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.713 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.713 | |
| 3fbs | FAD | Oxidoreductase | / | 0.712 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.712 | |
| 2jk6 | FAD | Trypanothione reductase | / | 0.711 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.711 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.710 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.710 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.710 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.708 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.708 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.708 | |
| 4j56 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.708 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.707 | |
| 2qa1 | FAD | PgaE | / | 0.707 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.707 | |
| 4ntc | FAD | Thioredoxin reductase gliT | / | 0.707 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.706 | |
| 3v76 | FDA | Uncharacterized protein | / | 0.706 | |
| 4a65 | FAD | Thioredoxin reductase | / | 0.706 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.706 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.706 | |
| 4gr1 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.705 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.705 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.704 | |
| 3f8r | NAP | NADH oxidase/thioredoxin reductase | / | 0.704 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.704 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.704 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.704 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.703 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.703 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.703 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.703 | |
| 1fec | FAD | Trypanothione reductase | 1.8.1.12 | 0.701 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.700 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.700 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.700 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.700 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.700 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.700 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.699 | |
| 2isl | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.699 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.699 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.699 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.699 | |
| 1cl0 | FAD | Thioredoxin reductase | 1.8.1.9 | 0.698 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.698 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.698 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.696 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.696 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.696 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.696 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.696 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.696 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.695 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.695 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.695 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.695 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.695 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.695 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.695 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.695 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.694 | |
| 4hnb | FMN | LOV protein | / | 0.694 | |
| 1feb | FAD | Trypanothione reductase | 1.8.1.12 | 0.693 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.693 | |
| 1wam | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.693 | |
| 4kpr | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.693 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.692 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.692 | |
| 4nev | FAD | Trypanothione reductase | / | 0.692 | |
| 1fea | FAD | Trypanothione reductase | 1.8.1.12 | 0.691 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.691 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.691 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.691 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.691 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.691 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.691 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.691 | |
| 2tmd | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.690 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.690 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.690 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.690 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.689 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.689 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.688 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.688 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.688 | |
| 2ylz | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.688 | |
| 4ccr | FAD | Thioredoxin reductase | / | 0.688 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.688 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.687 | |
| 3hgo | FMN | 12-oxophytodienoate reductase 3 | 1.3.1.42 | 0.687 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.687 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.687 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.687 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.686 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.686 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.686 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.686 | |
| 4yl2 | FMN | Lactate oxidase | / | 0.686 | |
| 2zzc | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.685 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.685 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.685 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.684 | |
| 1vdc | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.684 | |
| 3all | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.684 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.684 | |
| 5c2t | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.684 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.683 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.683 | |
| 1h63 | FMN | Pentaerythritol tetranitrate reductase | / | 0.682 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.682 | |
| 4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.682 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.681 | |
| 3kkj | FAD | Renalase | / | 0.681 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.681 | |
| 3sqp | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.681 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.681 | |
| 2j6x | FMN | Lactate oxidase | / | 0.680 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.680 | |
| 4b64 | FAD | L-ornithine N(5)-monooxygenase | / | 0.680 | |
| 1n9n | FMN | Putative blue light receptor | / | 0.679 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.679 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.679 | |
| 3p8i | FMN | Pentaerythritol tetranitrate reductase | / | 0.679 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.679 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.679 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.679 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.678 | |
| 1jqi | FAD | Short-chain specific acyl-CoA dehydrogenase, mitochondrial | / | 0.678 | |
| 1pdh | FAS | p-hydroxybenzoate hydroxylase | / | 0.678 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.678 | |
| 3dk9 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.678 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.678 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.678 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.678 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.677 | |
| 4ttc | FMN | Iodotyrosine deiodinase 1 | / | 0.677 | |
| 5jsc | FAD | Putative acyl-CoA dehydrogenase | / | 0.677 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.676 | |
| 2eba | FAD | Putative glutaryl-CoA dehydrogenase | / | 0.676 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.676 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.676 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.676 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.676 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.676 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.675 | |
| 1qcw | FNS | Cytochrome b2, mitochondrial | 1.1.2.3 | 0.675 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.675 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.675 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 0.675 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.674 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.674 | |
| 4d03 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.674 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.674 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.674 | |
| 4ykf | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.674 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.673 | |
| 1n9l | FMN | Putative blue light receptor | / | 0.673 | |
| 2j3n | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.673 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.673 | |
| 3sz0 | FAD | Sulfide-quinone reductase | / | 0.673 | |
| 3uov | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.673 | |
| 4z9r | FMN | Omega-3 polyunsaturated fatty acid synthase subunit PfaD | / | 0.673 | |
| 1djn | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.672 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.672 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.672 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.672 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.672 | |
| 4j36 | FAD | Kynurenine 3-monooxygenase | / | 0.672 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.671 | |
| 2oa1 | FAD | Flavin-dependent tryptophan halogenase RebH | 1.14.19.9 | 0.671 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 0.671 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.671 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.671 | |
| 1ges | FAD | Glutathione reductase | 1.8.1.7 | 0.670 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.670 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.670 | |
| 4awt | FMN | NADH:flavin oxidoreductase Sye1 | / | 0.670 | |
| 4k5r | FAD | Oxygenase | / | 0.670 | |
| 1djq | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.669 | |
| 1eje | FMN | Protein MTH_152 | / | 0.669 | |
| 1icp | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.669 | |
| 1ics | FMN | 12-oxophytodienoate reductase 1 | 1.3.1.42 | 0.669 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.669 | |
| 2iyi | FMN | AppA, antirepressor of ppsR, sensor of blue light | / | 0.669 | |
| 3ept | FDA | Putative FAD-monooxygenase | / | 0.669 | |
| 3fmw | FAD | Oxygenase | / | 0.669 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.669 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.668 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.668 | |
| 3sf6 | FDA | Glutaryl-CoA dehydrogenase | / | 0.668 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.667 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.667 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.667 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.667 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.667 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.667 | |
| 1bzl | FAD | Trypanothione reductase | 1.8.1.12 | 0.666 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.666 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.666 | |
| 2w0h | FAD | Trypanothione reductase | / | 0.666 | |
| 2wp5 | FAD | Trypanothione reductase | / | 0.666 | |
| 3klb | FMN | Uncharacterized protein | / | 0.666 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.666 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.665 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.665 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.665 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.665 | |
| 4rje | FNR | Lactate oxidase | / | 0.665 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.665 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.664 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.664 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.664 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.663 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.663 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.663 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.663 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.663 | |
| 4yus | FMN | Family 3 adenylate cyclase | / | 0.663 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.662 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.662 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.661 | |
| 1typ | FAD | Trypanothione reductase | 1.8.1.12 | 0.661 | |
| 2oz0 | FMN | Cytochrome b2, mitochondrial | 1.1.2.3 | 0.661 | |
| 2pr5 | FMN | Blue-light photoreceptor | / | 0.661 | |
| 2ylx | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.661 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.661 | |
| 5br7 | FAD | UDP-galactopyranose mutase | / | 0.661 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.660 | |
| 1o94 | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.660 | |
| 2ym1 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.660 | |
| 3qj4 | FAD | Renalase | / | 0.660 | |
| 4u8m | FDA | UDP-galactopyranose mutase | / | 0.660 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.659 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.659 | |
| 4gap | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.659 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.659 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.658 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.658 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.658 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.657 | |
| 2e48 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.657 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.657 | |
| 4a6n | FAD | TetX family tetracycline inactivation enzyme | / | 0.657 | |
| 3eo8 | FMN | Putative nitroreductase | / | 0.656 | |
| 3hdy | FDA | UDP-galactopyranose mutase | / | 0.656 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 0.656 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.655 | |
| 3gfd | FMN | Iodotyrosine deiodinase 1 | 1.21.1.1 | 0.655 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.655 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.655 | |
| 4aws | FMN | NADH:flavin oxidoreductase Sye1 | / | 0.655 | |
| 2dvl | FAD | Acyl-CoA dehydrogenase | / | 0.654 | |
| 3gwf | FAD | Cyclohexanone monooxygenase | / | 0.654 | |
| 3itj | FAD | Thioredoxin reductase 1 | 1.8.1.9 | 0.654 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.654 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.653 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.653 | |
| 1x0p | FAD | Tll0078 protein | / | 0.652 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.652 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.652 | |
| 3ihg | FAD | Aklavinone 12-hydroxylase RdmE | / | 0.652 | |
| 5eow | FAD | 6-hydroxynicotinate 3-monooxygenase | 1.14.13.114 | 0.652 | |
| 1knp | FAD | L-aspartate oxidase | 1.4.3.16 | 0.651 | |
| 3t2z | FAD | Sulfide-quinone reductase | / | 0.651 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.651 | |
| 4hhd | FMN | Phototropin-1 | 2.7.11.1 | 0.651 | |
| 1ofd | FMN | Ferredoxin-dependent glutamate synthase 2 | 1.4.7.1 | 0.650 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.650 | |
| 4wqm | FAD | Toluene-4-monooxygenase electron transfer component | 1.18.1.3 | 0.650 |