scPDB - Distribution of Binding mode Similarity values of 2f3r entry / Site 2

Distribution of Interaction pattern similarity measured by Grim

You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2f3r	G5P	Guanylate kinase	2.7.4.8

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
2f3r	G5P	Guanylate kinase	2.7.4.8	1.279
2j41	5GP	Guanylate kinase	/	0.743
3lnc	5GP	Guanylate kinase	/	0.734
1ex7	5GP	Guanylate kinase	2.7.4.8	0.693
2anb	5GP	Guanylate kinase	2.7.4.8	0.683
1lvg	5GP	Guanylate kinase	2.7.4.8	0.666