Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2euf LQQ Cyclin-dependent kinase 6 2.7.11.22

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2euf LQQCyclin-dependent kinase 6 2.7.11.22 1.006
4grb 0XGCasein kinase II subunit alpha 2.7.11.1 0.670
2jko BIJFocal adhesion kinase 1 2.7.10.2 0.668
4d58 BI9Focal adhesion kinase 1 2.7.10.2 0.665
3rk7 08ZCyclin-dependent kinase 2 2.7.11.22 0.662
1oit HDTCyclin-dependent kinase 2 2.7.11.22 0.661
3r9d X6BCyclin-dependent kinase 2 2.7.11.22 0.658
2x81 ZZLAurora kinase A 2.7.11.1 0.654
4d4s BI9Focal adhesion kinase 1 2.7.10.2 0.654
2r3m SCXCyclin-dependent kinase 2 2.7.11.22 0.652
4fkt 48KCyclin-dependent kinase 2 2.7.11.22 0.651