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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2dux ZST Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2dux ZSTAldose reductase 1.1.1.21 1.281
2hvo ZSTAldose reductase 1.1.1.21 1.203
2pd5 ZSTAldose reductase 1.1.1.21 1.146
2hv5 ZSTAldose reductase 1.1.1.21 1.121
2pdm ZSTAldose reductase 1.1.1.21 1.079
3mb9 ZSTAldose reductase 1.1.1.21 1.022
2pdx ZSTAldose reductase 1.1.1.21 1.012
3m0i ZSTAldose reductase 1.1.1.21 1.008
2pdn 47DAldose reductase 1.1.1.21 0.970
2dv0 ZSTAldose reductase 1.1.1.21 0.963
2pdg 47DAldose reductase 1.1.1.21 0.963
4gca 2X9Aldose reductase 1.1.1.21 0.954
1z3n 3NAAldose reductase 1.1.1.21 0.905
2fz8 ZSTAldose reductase 1.1.1.21 0.898
2pdi ZSTAldose reductase 1.1.1.21 0.888
2hvn ZSTAldose reductase 1.1.1.21 0.884
2pdh 47DAldose reductase 1.1.1.21 0.881
2duz ZSTAldose reductase 1.1.1.21 0.879
2pdb ZSTAldose reductase 1.1.1.21 0.872
3g5e Q74Aldose reductase 1.1.1.21 0.854
2pdf ZSTAldose reductase 1.1.1.21 0.825
2fz9 ZSTAldose reductase 1.1.1.21 0.816
2pdp 393Aldose reductase 1.1.1.21 0.793
3lql LDTAldose reductase 1.1.1.21 0.792
3lbo LDTAldose reductase 1.1.1.21 0.790
1frb ZSTAldose reductase-related protein 2 / 0.782
3ghu LDTAldose reductase 1.1.1.21 0.775
2pdj 393Aldose reductase 1.1.1.21 0.754
3ld5 LDTAldose reductase 1.1.1.21 0.748
3t42 3T4Aldose reductase 1.1.1.21 0.748
3m4h 388Aldose reductase 1.1.1.21 0.741
3ght LDTAldose reductase 1.1.1.21 0.736
1t41 ID5Aldose reductase 1.1.1.21 0.719
2pzn 393Aldose reductase 1.1.1.21 0.718
2ikj 393Aldose reductase 1.1.1.21 0.717
3mc5 393Aldose reductase 1.1.1.21 0.716
3m64 393Aldose reductase 1.1.1.21 0.713
1t40 ID5Aldose reductase 1.1.1.21 0.704
2pdc 393Aldose reductase 1.1.1.21 0.698
4yu1 53NAldose reductase 1.1.1.21 0.695
2nvc ITAAldose reductase 1.1.1.21 0.691
2pdu 393Aldose reductase 1.1.1.21 0.689
3len ZSTAldose reductase 1.1.1.21 0.688
2pdq 47DAldose reductase 1.1.1.21 0.666
2xb8 XNW3-dehydroquinate dehydratase 4.2.1.10 0.650