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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2cns ACO Ribosomal-protein-alanine acetyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2cns ACORibosomal-protein-alanine acetyltransferase / 1.214
2cnt COARibosomal-protein-alanine acetyltransferase / 0.982
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.948
5kf2 ACOPredicted acetyltransferase / 0.932
5kf8 ACOPredicted acetyltransferase / 0.919
5kgj ACOPredicted acetyltransferase / 0.917
5kgp ACOPredicted acetyltransferase / 0.916
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.903
5kf9 ACOPredicted acetyltransferase / 0.902
5kf1 ACOPredicted acetyltransferase / 0.870
2x7b COAN-alpha-acetyltransferase 2.3.1 0.853
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.832
4r3k COAN-alpha-acetyltransferase 2.3.1 0.832
2r8v ACOAmino-acid acetyltransferase / 0.830
2fiw ACOGCN5-related N-acetyltransferase:Aminotransferase, class-II / 0.829
5kgh ACOPredicted acetyltransferase / 0.823
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.822
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.814
2rc4 ACOHistone acetyltransferase KAT6A / 0.814
1ozp ACOMycothiol acetyltransferase 2.3.1.189 0.812
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.806
3dr8 ACOL-methionine sulfoximine/L-methionine sulfone acetyltransferase / 0.803
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.798
1wwz ACOUncharacterized protein / 0.796
1l0c COTSerotonin N-acetyltransferase / 0.791
1ghe ACOAcetyltransferase 2.3.1 0.789
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.788
3te4 ACODopamine N-acetyltransferase / 0.786
2a4n COAAac(6')-Ii protein / 0.785
1j4j ACOAcetyltransferase 2.3.1 0.784
4jwp ACOGCN5-related N-acetyltransferase / 0.778
3pgp ACOUncharacterized protein / 0.770
2jdc CAOProbable acetyltransferase / 0.769
1kuy COTSerotonin N-acetyltransferase / 0.763
3f0a ACOSpermidine N(1)-acetyltransferase / 0.756
1qsr ACOHAT A1 / 0.752
2q4v ACODiamine acetyltransferase 2 2.3.1.57 0.747
3k9u ACOSpermidine N(1)-acetyltransferase / 0.741
4kub COAUncharacterized protein / 0.734
3mgd ACOPredicted acetyltransferase / 0.732
1m4i COAAminoglycoside 2'-N-acetyltransferase 2.3.1 0.729
1pu9 COAHAT A1 / 0.721
1qsm ACOHistone acetyltransferase HPA2 / 0.720
4ri1 ACOUDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 2.3.1.202 0.717
2jdd ACOProbable acetyltransferase / 0.716
1tiq COASpermidine/spermine N(1)-acetyltransferase / 0.715
4jxr ACOAcetyltransferase / 0.715
2bsw CAOProbable acetyltransferase / 0.713
2bue COAAAC(6')-Ib / 0.713
2fxf ACODiamine acetyltransferase 1 / 0.712
5kf9 COAPredicted acetyltransferase / 0.712
1z4r ACOHistone acetyltransferase KAT2A 2.3.1.48 0.711
1mjb ACOHistone acetyltransferase ESA1 / 0.710
2vqy ACOAAC(6')-Ib / 0.710
2zw4 COABleomycin acetyltransferase / 0.709
3cz7 ACOHistone acetyltransferase RTT109 2.3.1.48 0.708
1mj9 COAHistone acetyltransferase ESA1 / 0.706
4qvt ACOAcetyltransferase YpeA 2.3.1 0.706
1kuv CA5Serotonin N-acetyltransferase / 0.705
1m4d COAAminoglycoside 2'-N-acetyltransferase 2.3.1 0.705
1qsn COAHAT A1 / 0.696
4u9v ACON-alpha-acetyltransferase 40 2.3.1 0.694
5kf8 COAPredicted acetyltransferase / 0.693
1ib1 COTSerotonin N-acetyltransferase / 0.691
5kf1 COAPredicted acetyltransferase / 0.690
1fy7 COAHistone acetyltransferase ESA1 / 0.689
3zj0 ACOPutative acetyltransferase OgpAT / 0.689
4a95 NHWGlycylpeptide N-tetradecanoyltransferase / 0.688
1pua COAHAT A1 / 0.687
1n71 COAAac(6')-Ii protein / 0.686
2giv ACOHistone acetyltransferase KAT8 / 0.683
5h84 1VUHistone acetyltransferase KAT2A 2.3.1.48 0.681
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.679
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.679
2vzz SCAPutative succinyl-CoA transferase Rv0802c 2.8.3 0.678
3r96 ACOMccE protein / 0.678
4mxe ACON-acetyltransferase ESCO1 2.3.1 0.674
2ge3 ACOProbable acetyltransferase / 0.673
3q33 ACOHistone acetyltransferase RTT109 2.3.1.48 0.670
3exn ACOProbable acetyltransferase / 0.669
1p0h ACOMycothiol acetyltransferase 2.3.1.189 0.668
2ou2 ACOHistone acetyltransferase KAT5 / 0.668
2y0m ACOHistone acetyltransferase KAT8 / 0.668
3bj7 COADiamine acetyltransferase 1 / 0.668
3d2m COAAmino-acid acetyltransferase / 0.668
4zm6 ACON-acetyl-beta-D glucosaminidase / 0.668
3r95 ACOMccE protein / 0.665
1cjw COTSerotonin N-acetyltransferase / 0.664
2zw5 COABleomycin acetyltransferase / 0.663
2vbq BSJAminoglycoside N(6')-acetyltransferase type 1 / 0.662
1kux CA3Serotonin N-acetyltransferase / 0.658
1cm0 COAHistone acetyltransferase KAT2B 2.3.1.48 0.654
4xnh ACON-terminal acetyltransferase A complex subunit NAT5 2.3.1 0.654
1m1d LYXHAT A1 / 0.651
4kvm SER_ALA_SER_GLU_1XEN-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.651