Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2cgu 3A3 Serine/threonine-protein kinase Chk1 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2cgu 3A3Serine/threonine-protein kinase Chk1 2.7.11.1 0.982
4fti H7KSerine/threonine-protein kinase Chk1 2.7.11.1 0.757
2cgx 3D3Serine/threonine-protein kinase Chk1 2.7.11.1 0.664
4ftj H8KSerine/threonine-protein kinase Chk1 2.7.11.1 0.661
4fst HK4Serine/threonine-protein kinase Chk1 2.7.11.1 0.657
2bfy H1NAurora kinase B-A 2.7.11.1 0.654