Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2cg5 | COA | L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase | 2.7.8 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
2cg5 | COA | L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase | 2.7.8 | 1.057 | |
2c43 | COA | L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase | 2.7.8 | 0.797 | |
4mrt | COA | 4'-phosphopantetheinyl transferase sfp | 2.7.8 | 0.728 | |
1qr0 | COA | 4'-phosphopantetheinyl transferase sfp | 2.7.8 | 0.724 |