Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2c43 COA L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2.7.8

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2c43 COAL-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2.7.8 1.341
1qr0 COA4'-phosphopantetheinyl transferase sfp 2.7.8 0.799
2cg5 COAL-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2.7.8 0.797
2wat COAFatty acid synthase subunit alpha 2.3.1.86 0.679
4mrt COA4'-phosphopantetheinyl transferase sfp 2.7.8 0.678
4qvh COAPhosphopantetheinyl transferase PptT (CoA:APO-[ACP]pantetheinephosphotransferase) (CoA:APO-[acyl-carrier protein]pantetheinephosphotransferase) / 0.650