Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2bhe BRY Cyclin-dependent kinase 2 2.7.11.22

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2bhe BRYCyclin-dependent kinase 2 2.7.11.22 0.891
1ke7 LS3Cyclin-dependent kinase 2 2.7.11.22 0.747
4fkv 61KCyclin-dependent kinase 2 2.7.11.22 0.744
4fkr 45KCyclin-dependent kinase 2 2.7.11.22 0.742
4fks 46KCyclin-dependent kinase 2 2.7.11.22 0.732
4fkt 48KCyclin-dependent kinase 2 2.7.11.22 0.728
1ke6 LS2Cyclin-dependent kinase 2 2.7.11.22 0.726
3ezv EZVCyclin-dependent kinase 2 2.7.11.22 0.721
1ke8 LS4Cyclin-dependent kinase 2 2.7.11.22 0.717
3ti1 B49Cyclin-dependent kinase 2 2.7.11.22 0.679
3lfq A28Cyclin-dependent kinase 2 2.7.11.22 0.678
3eb0 DRKUncharacterized protein / 0.677
1gih 1PUCyclin-dependent kinase 2 2.7.11.22 0.670
1fvv 107Cyclin-dependent kinase 2 2.7.11.22 0.668
4c59 FEFCyclin-G-associated kinase 2.7.11.1 0.661
4fkj 11KCyclin-dependent kinase 2 2.7.11.22 0.658
4fkp LS5Cyclin-dependent kinase 2 2.7.11.22 0.656
1pkd UCNCyclin-dependent kinase 2 2.7.11.22 0.653
2c3k ABOSerine/threonine-protein kinase Chk1 2.7.11.1 0.652
2r3r 6SCCyclin-dependent kinase 2 2.7.11.22 0.652
3lfs A07Cyclin-dependent kinase 2 2.7.11.22 0.652
4ek6 10KCyclin-dependent kinase 2 2.7.11.22 0.652