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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2bak AQZ Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2bak AQZMitogen-activated protein kinase 14 / 1.307
4a9y AQZMitogen-activated protein kinase 14 / 1.307
4aa0 AA0Mitogen-activated protein kinase 14 / 0.999
3kq7 KQ7Mitogen-activated protein kinase 14 / 0.937
3bv2 P38Mitogen-activated protein kinase 14 / 0.812
1wbv LI3Mitogen-activated protein kinase 14 / 0.799
5hid B1ESerine/threonine-protein kinase B-raf 2.7.11.1 0.774
3gcu R48Mitogen-activated protein kinase 14 / 0.749
1wbn L09Mitogen-activated protein kinase 14 / 0.745
3e93 19BMitogen-activated protein kinase 14 / 0.732
2zaz GK1Mitogen-activated protein kinase 14 / 0.720
3hv5 R24Mitogen-activated protein kinase 14 / 0.700
3fsf FSSMitogen-activated protein kinase 14 / 0.693
4aa5 NQBMitogen-activated protein kinase 14 / 0.683
3d83 GK6Mitogen-activated protein kinase 14 / 0.677
4i5h G17Mitogen-activated protein kinase 1 2.7.11.24 0.676
4bkj STIEpithelial discoidin domain-containing receptor 1 2.7.10.1 0.668
4fc0 0T2Serine/threonine-protein kinase B-raf 2.7.11.1 0.666
4aa4 QC0Mitogen-activated protein kinase 14 / 0.664
2pl0 STITyrosine-protein kinase Lck 2.7.10.2 0.662
4a80 2ANMajor pollen allergen Bet v 1-A / 0.661
2puc GUNHTH-type transcriptional repressor PurR / 0.659
3c1x CKKHepatocyte growth factor receptor 2.7.10.1 0.656
3fsk RO6Mitogen-activated protein kinase 14 / 0.656
3dt1 P40Mitogen-activated protein kinase 14 / 0.653