Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2b1i | 93A | Bifunctional purine biosynthesis protein PURH | 2.1.2.3 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
2b1i | 93A | Bifunctional purine biosynthesis protein PURH | 2.1.2.3 | 1.009 | |
1m9n | AMZ | Bifunctional purine biosynthesis protein PURH | 2.1.2.3 | 0.722 | |
4a1o | AMZ | Bifunctional purine biosynthesis protein PurH | 2.1.2.3 | 0.712 | |
3lut | NAP | Voltage-gated potassium channel subunit beta-2 | / | 0.658 | |
3rku | NAP | NADP-dependent 3-hydroxy acid dehydrogenase | / | 0.653 |