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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ao6 R18 Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2ao6 R18Androgen receptor / 1.093
1xow R18Androgen receptor / 1.039
1xq3 R18Androgen receptor / 1.024
1t76 DHTAndrogen receptor / 0.923
2amb 17HAndrogen receptor / 0.921
1t79 DHTAndrogen receptor / 0.908
1t73 DHTAndrogen receptor / 0.893
2z4j DHTAndrogen receptor / 0.887
1t7r DHTAndrogen receptor / 0.880
1e3g R18Androgen receptor / 0.878
2pio DHTAndrogen receptor / 0.876
2ylo TESAndrogen receptor / 0.874
4oez DHTAndrogen receptor / 0.874
2piv DHTAndrogen receptor / 0.865
1t74 DHTAndrogen receptor / 0.864
2ylp TESAndrogen receptor / 0.864
2pit DHTAndrogen receptor / 0.863
2ama DHTAndrogen receptor / 0.858
4ofr DHTAndrogen receptor / 0.858
4oey DHTAndrogen receptor / 0.856
2q7i TESAndrogen receptor / 0.855
2q7j TESAndrogen receptor / 0.852
4oed DHTAndrogen receptor / 0.849
2pip DHTAndrogen receptor / 0.848
2qpy DHTAndrogen receptor / 0.844
1t63 DHTAndrogen receptor / 0.841
2pkl DHTAndrogen receptor / 0.827
1t5z DHTAndrogen receptor / 0.819
2yhd TESAndrogen receptor / 0.805
2q7l TESAndrogen receptor / 0.804
4hlw TESAndrogen receptor / 0.797
4k7a DHTAndrogen receptor / 0.793
3zqt TESAndrogen receptor / 0.792
2am9 TESAndrogen receptor / 0.780
4ofu DHTAndrogen receptor / 0.778
4oea DHTAndrogen receptor / 0.775
1t7f DHTAndrogen receptor / 0.749
1t7t DHTAndrogen receptor / 0.748
1gs4 ZK5Androgen receptor / 0.738
2ylq TESAndrogen receptor / 0.727
2pir DHTAndrogen receptor / 0.724
1e3k R18Progesterone receptor / 0.700
4e5l DBHPolymerase acidic protein / 0.700
1sqn NDRProgesterone receptor / 0.697
2w8y 486Progesterone receptor / 0.689
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.689
2oax SNLMineralocorticoid receptor / 0.686
3uud ESTEstrogen receptor / 0.680
2q7k TESAndrogen receptor / 0.679
4pxm ESTEstrogen receptor / 0.674
5dx3 ESTEstrogen receptor / 0.665
2yja ESTEstrogen receptor / 0.664
3bur TES3-oxo-5-beta-steroid 4-dehydrogenase / 0.656
1h60 STRPentaerythritol tetranitrate reductase / 0.652