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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1ywr LI9 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1ywr LI9Mitogen-activated protein kinase 14 / 1.163
1yw2 PGJMitogen-activated protein kinase 14 / 0.774
3obg SB2Mitogen-activated protein kinase 14 / 0.769
1oz1 FPHMitogen-activated protein kinase 14 / 0.750
1bmk SB5Mitogen-activated protein kinase 14 / 0.739
1bl6 SB6Mitogen-activated protein kinase 14 / 0.731
1zzl TZYMitogen-activated protein kinase 14 / 0.728
4ewq MWLMitogen-activated protein kinase 14 / 0.717
2qd9 LGFMitogen-activated protein kinase 14 / 0.709
1ouk 084Mitogen-activated protein kinase 14 / 0.706
4loo SB4Mitogen-activated protein kinase 14 / 0.706
2ewa SB2Mitogen-activated protein kinase 14 / 0.705
3fml FMLMitogen-activated protein kinase 14 / 0.704
2ghl LIBMitogen-activated protein kinase 14 / 0.701
3fmj FMJMitogen-activated protein kinase 14 / 0.698
1pmn 984Mitogen-activated protein kinase 10 2.7.11.24 0.697
3uyt 0CKCasein kinase I isoform delta 2.7.11.1 0.694
3fkn FKNMitogen-activated protein kinase 14 / 0.683
3hvc GG5Mitogen-activated protein kinase 14 / 0.682
3roc 29AMitogen-activated protein kinase 14 / 0.682
3fmm XI2Mitogen-activated protein kinase 14 / 0.680
3mpa SB2Mitogen-activated protein kinase 14 / 0.675
4loq SB4Mitogen-activated protein kinase 14 / 0.665
2ghm LICMitogen-activated protein kinase 14 / 0.658
1m7q DQOMitogen-activated protein kinase 14 / 0.655