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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1yw2 PGJ Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1yw2 PGJMitogen-activated protein kinase 14 / 1.021
4lop SB4Mitogen-activated protein kinase 14 / 0.780
3hvc GG5Mitogen-activated protein kinase 14 / 0.775
1ywr LI9Mitogen-activated protein kinase 14 / 0.774
3fmm XI2Mitogen-activated protein kinase 14 / 0.765
4loo SB4Mitogen-activated protein kinase 14 / 0.753
3roc 29AMitogen-activated protein kinase 14 / 0.742
3obg SB2Mitogen-activated protein kinase 14 / 0.737
1bl7 SB4Mitogen-activated protein kinase 14 / 0.736
3fml FMLMitogen-activated protein kinase 14 / 0.729
1zzl TZYMitogen-activated protein kinase 14 / 0.716
3fkn FKNMitogen-activated protein kinase 14 / 0.715
2ghm LICMitogen-activated protein kinase 14 / 0.708
3fmk FMKMitogen-activated protein kinase 14 / 0.706
2qd9 LGFMitogen-activated protein kinase 14 / 0.705
3hp5 52PMitogen-activated protein kinase 14 / 0.700
4loq SB4Mitogen-activated protein kinase 14 / 0.700
3fmj FMJMitogen-activated protein kinase 14 / 0.687
3kf7 L9GMitogen-activated protein kinase 14 / 0.686
4f9w LM4Mitogen-activated protein kinase 14 / 0.679
1zz2 B11Mitogen-activated protein kinase 14 / 0.676
1m7q DQOMitogen-activated protein kinase 14 / 0.674
3fi4 FI4Mitogen-activated protein kinase 14 / 0.669
1ove 358Mitogen-activated protein kinase 14 / 0.660
3iw7 IPKMitogen-activated protein kinase 14 / 0.659
3zsi 52PMitogen-activated protein kinase 14 / 0.659
3qud N3FMitogen-activated protein kinase 14 / 0.656
1bmk SB5Mitogen-activated protein kinase 14 / 0.655
2gtm LIDMitogen-activated protein kinase 14 / 0.655
2ghl LIBMitogen-activated protein kinase 14 / 0.650
3fly FLYMitogen-activated protein kinase 14 / 0.650
3hl7 I47Mitogen-activated protein kinase 14 / 0.650
3zs5 SB2Mitogen-activated protein kinase 14 / 0.650