scPDB - Distribution of Binding mode Similarity values of 1y60 entry / Site 3

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1y60	H4M	5,6,7,8-tetrahydromethanopterin hydro-lyase	4.2.1.147

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
1y60	H4M	5,6,7,8-tetrahydromethanopterin hydro-lyase	4.2.1.147	1.268
4yt5	H4M	H(2)-forming methylenetetrahydromethanopterin dehydrogenase-related protein MJ1338	/	0.684
4gvq	N4M	Methenyltetrahydromethanopterin cyclohydrolase	3.5.4.27	0.670