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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1wbw LI4 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1wbw LI4Mitogen-activated protein kinase 14 / 0.991
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4ewq MWLMitogen-activated protein kinase 14 / 0.727
2b1p AIZMitogen-activated protein kinase 10 2.7.11.24 0.720
3fmj FMJMitogen-activated protein kinase 14 / 0.707
3fko FKOMitogen-activated protein kinase 14 / 0.677
1di9 MSQMitogen-activated protein kinase 14 / 0.668
1w7h 3IPMitogen-activated protein kinase 14 / 0.668
3fl4 FL4Mitogen-activated protein kinase 14 / 0.666
2z7q ACPRibosomal protein S6 kinase alpha-1 2.7.11.1 0.663
4jrv KJVEpidermal growth factor receptor 2.7.10.1 0.661
4e5f 0N7Polymerase acidic protein / 0.660
3mpa SB2Mitogen-activated protein kinase 14 / 0.658
1wzy F29Mitogen-activated protein kinase 1 2.7.11.24 0.650