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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1vf2 GTX Glutathione S-transferase 3 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 1.321
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.977
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.909
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.857
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.854
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.838
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.819
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.808
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.786
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.776
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.775
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.773
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.766
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.747
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.744
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.724
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.721
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.708
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.706
1k0c GTBTranscriptional regulator URE2 / 0.703
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.701
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.700
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.699
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.694
3f63 GTXGlutathione transferase GST1-4 / 0.690
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.679
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.677
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.662
1k0a GTXTranscriptional regulator URE2 / 0.659
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.657
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.654
1ml6 GBXGlutathione S-transferase A2 2.5.1.18 0.650