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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1tco FK5 Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1tco FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 1.520
1tco FK5Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform 3.1.3.16 1.520
3ihz FK5Peptidylprolyl isomerase / 1.033
1fkj FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.938
1fkf FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.931
3o5r FK5Peptidyl-prolyl cis-trans isomerase FKBP5 5.2.1.8 0.919
4dz2 FK5Peptidyl-prolyl cis-trans isomerase / 0.912
2fke FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.904
2vn1 FK5Peptidylprolyl isomerase / 0.904
1qpf 858Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.903
1fkd 818Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.891
2dg3 RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.830
1bkf FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.825
4qt3 RAPPeptidylprolyl isomerase / 0.798
1c9h RAPPeptidyl-prolyl cis-trans isomerase FKBP1B 5.2.1.8 0.794
4odo FK5Peptidyl-prolyl cis-trans isomerase / 0.764
2dg4 RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.749
4drm 0MCPeptidyl-prolyl cis-trans isomerase FKBP5 5.2.1.8 0.747
4dh0 MR8Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.743
1qpl 587Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.741
1fkb RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.731
1fkl RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.725
1a7x FKAPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.678
1fki SB1Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.666
1bl4 AP1Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.661
4lay I63Peptidyl-prolyl cis-trans isomerase FKBP4 5.2.1.8 0.656