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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1t9b 1CS Acetolactate synthase catalytic subunit, mitochondrial 2.2.1.6

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1t9b 1CSAcetolactate synthase catalytic subunit, mitochondrial 2.2.1.6 0.998
1t9d 1MMAcetolactate synthase catalytic subunit, mitochondrial 2.2.1.6 0.912
1t9a 1TBAcetolactate synthase catalytic subunit, mitochondrial 2.2.1.6 0.898
1n0h CIEAcetolactate synthase catalytic subunit, mitochondrial 2.2.1.6 0.865
1t9c 1SMAcetolactate synthase catalytic subunit, mitochondrial 2.2.1.6 0.834