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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1t7t DHT Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1t7t DHTAndrogen receptor / 1.240
1t7f DHTAndrogen receptor / 1.203
2piu DHTAndrogen receptor / 1.164
2piv DHTAndrogen receptor / 1.164
1t76 DHTAndrogen receptor / 1.156
1t63 DHTAndrogen receptor / 1.131
2z4j DHTAndrogen receptor / 1.111
4ofu DHTAndrogen receptor / 1.109
1t73 DHTAndrogen receptor / 1.093
2pix DHTAndrogen receptor / 1.087
1t5z DHTAndrogen receptor / 1.077
1t79 DHTAndrogen receptor / 1.077
4oed DHTAndrogen receptor / 1.066
2pkl DHTAndrogen receptor / 1.056
2piq DHTAndrogen receptor / 1.041
2pir DHTAndrogen receptor / 1.034
2q7l TESAndrogen receptor / 1.033
2q7j TESAndrogen receptor / 1.027
2am9 TESAndrogen receptor / 1.021
2ylq TESAndrogen receptor / 0.960
2pit DHTAndrogen receptor / 0.925
4oey DHTAndrogen receptor / 0.921
2pio DHTAndrogen receptor / 0.913
2ama DHTAndrogen receptor / 0.885
1t74 DHTAndrogen receptor / 0.875
4ofr DHTAndrogen receptor / 0.871
1xow R18Androgen receptor / 0.868
1t7r DHTAndrogen receptor / 0.865
4oea DHTAndrogen receptor / 0.852
1t7m DHTAndrogen receptor / 0.841
2q7i TESAndrogen receptor / 0.839
2amb 17HAndrogen receptor / 0.833
2q7k TESAndrogen receptor / 0.829
2ylp TESAndrogen receptor / 0.828
4k7a DHTAndrogen receptor / 0.828
1gs4 ZK5Androgen receptor / 0.826
2piw DHTAndrogen receptor / 0.824
1t65 DHTAndrogen receptor / 0.788
2pip DHTAndrogen receptor / 0.785
1xq3 R18Androgen receptor / 0.784
4oez DHTAndrogen receptor / 0.775
2ylo TESAndrogen receptor / 0.772
2ao6 R18Androgen receptor / 0.748
4hlw TESAndrogen receptor / 0.739
2yhd TESAndrogen receptor / 0.736
1i5r HYCEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.707
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.699
1coy ANDCholesterol oxidase 1.1.3.6 0.698
1lri CLRBeta-elicitin cryptogein / 0.695
4e5l DBHPolymerase acidic protein / 0.695
1xj7 DHTAndrogen receptor / 0.692
1sqn NDRProgesterone receptor / 0.690
1e3k R18Progesterone receptor / 0.681
2qpy DHTAndrogen receptor / 0.671
1lhn AONSex hormone-binding globulin / 0.670
3cmf PDN3-oxo-5-beta-steroid 4-dehydrogenase / 0.670
1y5r C0RCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.669
3iw1 ASDSteroid C26-monooxygenase 1.14.13.141 0.669
1jtv TESEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.665
3nhx ASDSteroid Delta-isomerase 5.3.3.1 0.660
4apu A2KProgesterone receptor / 0.660
1xu7 CPSCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.658
3oll ESTEstrogen receptor beta / 0.658
3uzx AOX3-oxo-5-beta-steroid 4-dehydrogenase / 0.655