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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1t7r DHT Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1t7r DHTAndrogen receptor / 1.191
1t79 DHTAndrogen receptor / 1.168
1t7f DHTAndrogen receptor / 1.159
2pit DHTAndrogen receptor / 1.150
4oey DHTAndrogen receptor / 1.139
1t76 DHTAndrogen receptor / 1.138
1t5z DHTAndrogen receptor / 1.131
4ofr DHTAndrogen receptor / 1.123
1t7m DHTAndrogen receptor / 1.120
1t74 DHTAndrogen receptor / 1.118
2pio DHTAndrogen receptor / 1.116
2pip DHTAndrogen receptor / 1.115
2ama DHTAndrogen receptor / 1.112
4oez DHTAndrogen receptor / 1.111
1t73 DHTAndrogen receptor / 1.107
4oea DHTAndrogen receptor / 1.107
1t65 DHTAndrogen receptor / 1.100
2z4j DHTAndrogen receptor / 1.095
2piw DHTAndrogen receptor / 1.092
2piv DHTAndrogen receptor / 1.087
2pix DHTAndrogen receptor / 1.080
2piq DHTAndrogen receptor / 1.071
2pkl DHTAndrogen receptor / 1.069
2qpy DHTAndrogen receptor / 1.067
2q7i TESAndrogen receptor / 1.066
2piu DHTAndrogen receptor / 1.054
2q7l TESAndrogen receptor / 1.044
2q7k TESAndrogen receptor / 1.036
4oed DHTAndrogen receptor / 1.030
2ylp TESAndrogen receptor / 1.027
4hlw TESAndrogen receptor / 0.998
1xj7 DHTAndrogen receptor / 0.977
2pnu ENMAndrogen receptor / 0.932
2ao6 R18Androgen receptor / 0.880
1t7t DHTAndrogen receptor / 0.865
1xow R18Androgen receptor / 0.840
2q7j TESAndrogen receptor / 0.824
1gs4 ZK5Androgen receptor / 0.812
2amb 17HAndrogen receptor / 0.805
1t63 DHTAndrogen receptor / 0.802
2am9 TESAndrogen receptor / 0.800
1xq3 R18Androgen receptor / 0.789
2ylq TESAndrogen receptor / 0.785
4ofu DHTAndrogen receptor / 0.784
2pir DHTAndrogen receptor / 0.715
1sqn NDRProgesterone receptor / 0.709
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.706
1i5r HYCEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.704
2aax PDNMineralocorticoid receptor / 0.701
4pxm ESTEstrogen receptor / 0.700
4e5l DBHPolymerase acidic protein / 0.696
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.691
1lho AOMSex hormone-binding globulin / 0.689
3uzx AOM3-oxo-5-beta-steroid 4-dehydrogenase / 0.681
3uzx AOX3-oxo-5-beta-steroid 4-dehydrogenase / 0.680
3nhx ASDSteroid Delta-isomerase 5.3.3.1 0.679
4qe6 JN3Bile acid receptor / 0.679
4k7a DHTAndrogen receptor / 0.678
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.674
3w5q 3KLVitamin D3 receptor / 0.674
2j7x ESTEstrogen receptor beta / 0.673
1jtv TESEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.670
2ylo TESAndrogen receptor / 0.670
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.670
4q0a 4OAVitamin D3 receptor A / 0.668
1lri CLRBeta-elicitin cryptogein / 0.667
1xu7 CPSCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.665
3iw1 ASDSteroid C26-monooxygenase 1.14.13.141 0.664
1lhn AONSex hormone-binding globulin / 0.656
2lba CHOFatty acid binding protein 6 / 0.652
1coy ANDCholesterol oxidase 1.1.3.6 0.651
2yhd TESAndrogen receptor / 0.650