Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1s36 | CEI | Obelin |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
1s36 | CEI | Obelin | / | 1.093 | |
1jf2 | CZH | Obelin | / | 0.848 | |
1el4 | CTZ | Obelin | / | 0.805 | |
1jf0 | CZH | Obelin | / | 0.773 | |
1ej3 | CZH | Aequorin-2 | / | 0.760 | |
1uhj | CZB | Aequorin-2 | / | 0.750 | |
4n1f | CZH | Obelin | / | 0.747 | |
4mrx | CZH | Obelin | / | 0.738 | |
1qv0 | CZH | Obelin | / | 0.733 | |
1sl9 | CZH | Obelin | / | 0.727 | |
4nqg | CZH | Mitrocomin | / | 0.717 | |
2f8p | CEI | Obelin | / | 0.692 | |
1qv1 | CZH | Obelin | / | 0.679 |