sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1rsg | FAD | Polyamine oxidase FMS1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 1.528 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 1.317 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 1.274 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 1.239 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 1.218 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 1.209 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 1.200 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 1.196 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 1.169 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 1.164 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 1.143 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 1.107 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 1.097 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 1.077 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 1.071 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 1.071 | |
| 2e1m | FAD | L-glutamate oxidase | / | 1.069 | |
| 2yg3 | FAD | Putrescine oxidase | / | 1.063 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 1.061 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 1.060 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 1.047 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 1.044 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 1.023 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 1.021 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 1.020 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 1.015 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 1.010 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 1.008 | |
| 3qj4 | FAD | Renalase | / | 1.008 | |
| 2yg6 | FAD | Putrescine oxidase | / | 1.006 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.988 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.985 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.985 | |
| 3rha | FDA | Putrescine oxidase | / | 0.983 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.982 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.967 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.962 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.958 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.956 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.952 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.943 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.933 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.928 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.925 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.924 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.912 | |
| 3kkj | FAD | Renalase | / | 0.909 | |
| 3zdn | FAD | Monoamine oxidase N | 1.4.3.4 | 0.906 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.899 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.895 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.893 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.892 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.890 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.884 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.868 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.841 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.841 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.839 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.837 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.837 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.836 | |
| 2bab | FAD | Putative aminooxidase | / | 0.834 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.833 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.833 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.824 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.824 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.823 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.823 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.822 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.820 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.817 | |
| 4u8m | FDA | UDP-galactopyranose mutase | / | 0.814 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.810 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.808 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.808 | |
| 4u8i | FDA | UDP-galactopyranose mutase | / | 0.808 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.806 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.806 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.805 | |
| 3ukl | FAD | UDP-galactopyranose mutase | / | 0.804 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.803 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.803 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.803 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.802 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.802 | |
| 2bi7 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.800 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.800 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.798 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.798 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.797 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.797 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.797 | |
| 3ukk | FAD | UDP-galactopyranose mutase | / | 0.795 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.793 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.792 | |
| 2bac | FAD | Putative aminooxidase | / | 0.791 | |
| 3ukk | FDA | UDP-galactopyranose mutase | / | 0.791 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.790 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.787 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.787 | |
| 1d7y | FAD | Ferredoxin reductase | / | 0.786 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.786 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.784 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.784 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.783 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.782 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.781 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.781 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.781 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.779 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.777 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.777 | |
| 3k7t | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.776 | |
| 4uir | FAD | Oleate hydratase | 4.2.1.53 | 0.776 | |
| 3utg | FDA | UDP-galactopyranose mutase | / | 0.775 | |
| 1gv4 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.774 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.774 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.774 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.772 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.772 | |
| 1f3p | FAD | Ferredoxin reductase | / | 0.771 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.771 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.770 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.770 | |
| 4u8o | FDA | UDP-galactopyranose mutase | / | 0.769 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.767 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.766 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.766 | |
| 4dsh | FDA | Uncharacterized protein | / | 0.765 | |
| 4j2w | FAD | Kynurenine 3-monooxygenase | / | 0.765 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.764 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.764 | |
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.764 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.763 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.763 | |
| 3s55 | NAD | Putative short-chain dehydrogenase/reductase | / | 0.763 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.762 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.762 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.762 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.762 | |
| 4fx9 | FAD | Coenzyme A disulfide reductase | 1.8.1.14 | 0.762 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.762 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.761 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.761 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.761 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.760 | |
| 3mj4 | FAD | UDP-galactopyranose mutase | / | 0.760 | |
| 4j33 | FAD | Kynurenine 3-monooxygenase | / | 0.760 | |
| 5i39 | FAD | L-amino acid deaminase | / | 0.760 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.759 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.759 | |
| 1m6i | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.757 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.757 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.756 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.755 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.754 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.754 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.754 | |
| 4ykf | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.754 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.753 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.751 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.751 | |
| 3gd3 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.751 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.751 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.751 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.750 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.749 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.748 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.748 | |
| 4h4q | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.748 | |
| 2rab | FAD | Glutathione amide reductase | / | 0.747 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.747 | |
| 4h4t | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.747 | |
| 4h4v | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.747 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.745 | |
| 4h4y | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.745 | |
| 4ntc | FAD | Thioredoxin reductase gliT | / | 0.745 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.744 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.744 | |
| 4j36 | FAD | Kynurenine 3-monooxygenase | / | 0.744 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.744 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.744 | |
| 4ysh | FAD | Glycine oxidase | / | 0.744 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.743 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.743 | |
| 4yxd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.743 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.742 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.742 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.741 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.741 | |
| 2rgh | FAD | Alpha-Glycerophosphate Oxidase | / | 0.741 | |
| 3dk4 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.741 | |
| 2gqw | FAD | Ferredoxin reductase | / | 0.740 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.740 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.739 | |
| 4h4w | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.739 | |
| 4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.739 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.738 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.738 | |
| 5ez7 | FAD | Probable FAD-dependent oxidoreductase PA4991 | / | 0.738 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.737 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.737 | |
| 3lb8 | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.737 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.737 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.737 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.737 | |
| 1nai | NAD | UDP-glucose 4-epimerase | 5.1.3.2 | 0.736 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.736 | |
| 1q1w | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.736 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.736 | |
| 4bk3 | FAD | Probable salicylate monooxygenase | / | 0.736 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.736 | |
| 1y56 | ATP | Uncharacterized protein | / | 0.735 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.734 | |
| 4nev | FAD | Trypanothione reductase | / | 0.734 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.733 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.733 | |
| 4h4s | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.732 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.731 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.730 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.730 | |
| 4a65 | FAD | Thioredoxin reductase | / | 0.730 | |
| 1kvr | NAD | UDP-glucose 4-epimerase | 5.1.3.2 | 0.729 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.729 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.728 | |
| 2v3a | FAD | Rubredoxin-NAD(+) reductase | 1.18.1.1 | 0.728 | |
| 3sx2 | NAD | Uncharacterized protein | / | 0.728 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.728 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.727 | |
| 3alj | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.727 | |
| 3hdy | FDA | UDP-galactopyranose mutase | / | 0.727 | |
| 3lsh | FAD | Pyranose 2-oxidase | / | 0.727 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.726 | |
| 4x9m | FAD | Uncharacterized protein MG039 homolog | / | 0.726 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.725 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.725 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.725 | |
| 2gmj | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.724 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.724 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.723 | |
| 4j31 | FAD | Kynurenine 3-monooxygenase | / | 0.723 | |
| 3all | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.722 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.722 | |
| 4h50 | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.722 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.721 | |
| 2c4c | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.721 | |
| 2q1w | NAD | Putative nucleotide sugar epimerase/ dehydratase | / | 0.721 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.721 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.720 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.720 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 0.720 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.720 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.720 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.719 | |
| 5hxw | FAD | L-amino acid deaminase | / | 0.719 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.718 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.718 | |
| 4kx6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.718 | |
| 4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.717 | |
| 4opt | FDA | Conserved Archaeal protein | / | 0.716 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.715 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.715 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.715 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.714 | |
| 4h4r | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.714 | |
| 4usr | FAD | Monooxygenase | / | 0.714 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.714 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.713 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.713 | |
| 3dgz | FAD | Thioredoxin reductase 2, mitochondrial | 1.8.1.9 | 0.713 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.712 | |
| 2yvj | FAD | Ferredoxin reductase | / | 0.712 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.712 | |
| 2gr1 | FAD | Ferredoxin reductase | / | 0.711 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.711 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.711 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.711 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.710 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.710 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.709 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.709 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.709 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.709 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.709 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.708 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.708 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.708 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.707 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.707 | |
| 1mok | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.707 | |
| 2a8x | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.707 | |
| 4h2n | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.707 | |
| 4yjd | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.707 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.706 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.706 | |
| 1zy8 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.705 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.705 | |
| 4k5r | FAD | Oxygenase | / | 0.705 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.704 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.704 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.704 | |
| 2cdu | FAD | NADH oxidase | / | 0.704 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.704 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.704 | |
| 4bur | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.704 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.703 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.703 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.703 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.702 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.702 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.702 | |
| 4fk1 | FAD | Putative thioredoxin reductase | / | 0.702 | |
| 1jeh | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.701 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.701 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.701 | |
| 4tm1 | FDA | KtzI | / | 0.701 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.699 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.699 | |
| 2vqb | FAD | Putative flavin-containing monooxygenase | / | 0.699 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.699 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.698 | |
| 2tmd | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.698 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.698 | |
| 4h4z | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.698 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.698 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.698 | |
| 1kf6 | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.697 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.697 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.697 | |
| 4h2p | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.697 | |
| 3dme | FAD | Putative conserved exported protein | / | 0.696 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.696 | |
| 3v76 | FDA | Uncharacterized protein | / | 0.696 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.695 | |
| 2r0c | FAD | Putative FAD-monooxygenase | / | 0.695 | |
| 4h4p | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.695 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.694 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.694 | |
| 2ylw | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.694 | |
| 4gap | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.694 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.693 | |
| 1ve9 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.693 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.693 | |
| 4j56 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.693 | |
| 3cgb | FAD | Coenzyme A disulfide reductase | / | 0.692 | |
| 4x9n | FAD | Uncharacterized protein MG039 homolog | / | 0.692 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.690 | |
| 3sfe | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.690 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.690 | |
| 4d7e | FAD | Putative lysine-N-oxygenase | / | 0.690 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.690 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.689 | |
| 3sfd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.689 | |
| 4jnq | FDA | Thioredoxin reductase | / | 0.689 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.689 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.689 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.689 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.687 | |
| 1djn | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.687 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.687 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.687 | |
| 4nte | FAD | DepH | / | 0.687 | |
| 1cl0 | FAD | Thioredoxin reductase | 1.8.1.9 | 0.686 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.686 | |
| 1q1r | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.686 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.686 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.685 | |
| 3dk9 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.685 | |
| 4jy2 | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.685 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.684 | |
| 1e1l | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.683 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.683 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.683 | |
| 1pdh | FAS | p-hydroxybenzoate hydroxylase | / | 0.682 | |
| 2qa1 | FAD | PgaE | / | 0.682 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.681 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.681 | |
| 3qfb | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.681 | |
| 4b66 | FAD | L-ornithine N(5)-monooxygenase | / | 0.681 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 0.681 | |
| 3da1 | FAD | Glycerol-3-phosphate dehydrogenase | / | 0.680 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.680 | |
| 3znp | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.680 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.680 | |
| 1nqa | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.679 | |
| 3ept | FDA | Putative FAD-monooxygenase | / | 0.679 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.678 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.678 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.678 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.678 | |
| 2rgj | FAD | Flavin-containing monooxygenase | / | 0.677 | |
| 2wp5 | FAD | Trypanothione reductase | / | 0.677 | |
| 4h4x | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.677 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.676 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.676 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.676 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.676 | |
| 1feb | FAD | Trypanothione reductase | 1.8.1.12 | 0.675 | |
| 2gr3 | FAD | Ferredoxin reductase | / | 0.675 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.675 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.675 | |
| 2wow | FAD | Trypanothione reductase | / | 0.674 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.674 | |
| 4qi4 | FAD | Cellobiose dehydrogenase | / | 0.674 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.673 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.673 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.673 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.673 | |
| 5buk | FAD | FADH2-dependent halogenase | / | 0.673 | |
| 3fbs | FAD | Oxidoreductase | / | 0.672 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.672 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.672 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.671 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.671 | |
| 3if9 | FAD | Glycine oxidase | 1.4.3.19 | 0.671 | |
| 3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.670 | |
| 4fn4 | NAD | Short chain dehydrogenase | / | 0.670 | |
| 4tm4 | FDA | KtzI | / | 0.670 | |
| 2qa2 | FAD | Polyketide oxygenase CabE | / | 0.669 | |
| 2w0h | FAD | Trypanothione reductase | / | 0.669 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.669 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.669 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.668 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.668 | |
| 3sqp | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.668 | |
| 1djq | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.667 | |
| 2zzc | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.667 | |
| 3alm | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.667 | |
| 3uka | FAD | UDP-galactopyranose mutase | / | 0.667 | |
| 5c3j | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.667 | |
| 1la2 | NAD | Inositol-3-phosphate synthase | 5.5.1.4 | 0.666 | |
| 1typ | FAD | Trypanothione reductase | 1.8.1.12 | 0.666 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.666 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.666 | |
| 3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.665 | |
| 3jyo | NAD | Quinate/shikimate dehydrogenase (NAD(+)) | / | 0.665 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.665 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.665 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.665 | |
| 4tm3 | FAD | KtzI | / | 0.665 | |
| 2ar8 | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.664 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.664 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.664 | |
| 2yls | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.664 | |
| 3g5q | FAD | Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO | / | 0.664 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.663 | |
| 2xls | FAD | Putative flavin-containing monooxygenase | / | 0.663 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.662 | |
| 2xvh | FAD | Putative flavin-containing monooxygenase | / | 0.662 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.661 | |
| 1hdg | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.661 | |
| 2oal | FAD | Flavin-dependent tryptophan halogenase RebH | 1.14.19.9 | 0.661 | |
| 3cuk | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.661 | |
| 4aox | FAD | Steroid monooxygenase | / | 0.661 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.660 | |
| 2eq7 | NAD | Dihydrolipoyl dehydrogenase | / | 0.660 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.660 | |
| 4jn9 | FAD | DepH | / | 0.660 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.659 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.659 | |
| 5hhf | FDA | UDP-galactopyranose mutase | / | 0.659 | |
| 1ges | FAD | Glutathione reductase | 1.8.1.7 | 0.658 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.658 | |
| 2jk6 | FAD | Trypanothione reductase | / | 0.658 | |
| 4m52 | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.658 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.658 | |
| 1k4q | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.657 | |
| 3itj | FAD | Thioredoxin reductase 1 | 1.8.1.9 | 0.657 | |
| 3jsk | AHZ | Thiamine thiazole synthase | / | 0.657 | |
| 4lsm | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.657 | |
| 4o59 | NAD | Glyceraldehyde-3-phosphate dehydrogenase | 1.2.1.12 | 0.656 | |
| 1nq5 | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.655 | |
| 1o94 | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.655 | |
| 1p1h | NAD | Inositol-3-phosphate synthase | 5.5.1.4 | 0.655 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.655 | |
| 2e48 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.654 | |
| 2wes | FAD | Tryptophan 5-halogenase | / | 0.654 | |
| 4gr1 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.654 | |
| 5bp7 | SAH | SAM-dependent methyltransferase | / | 0.654 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.653 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.653 | |
| 4kpr | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.653 | |
| 4opu | FDA | Conserved Archaeal protein | / | 0.653 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 0.652 | |
| 3cif | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.652 | |
| 2o06 | MTA | Spermidine synthase | 2.5.1.16 | 0.651 | |
| 2x8h | FAD | Thioredoxin glutathione reductase | / | 0.651 | |
| 3aeb | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.651 | |
| 5eow | FAD | 6-hydroxynicotinate 3-monooxygenase | 1.14.13.114 | 0.651 | |
| 1szj | NAD | Glyceraldehyde-3-phosphate dehydrogenase | 1.2.1.12 | 0.650 | |
| 2ylx | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.650 |