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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1rs6 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.918
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.912
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.907
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.904
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.901
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.901
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.900
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.899
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.897
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.896
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.895
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.895
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.895
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.895
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.894
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.893
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.893
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.893
3png H4BNitric oxide synthase, brain 1.14.13.39 0.892
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.892
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.892
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.891
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.891
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.891
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.891
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.891
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.891
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.890
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.890
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.890
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.888
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.887
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.887
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.883
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.882
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.882
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.881
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.881
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.876
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.873
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.873
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.870
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.870
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.865
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.856
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.855
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.855
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.854
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.854
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.854
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.853
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.852
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.850
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.843
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.842
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.842
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.841
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.838
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.836
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.835
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.834
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.832
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.831
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.830
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.827
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.827
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.821
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.818
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.815
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.814
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.813
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.809
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.805
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.801
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.790
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.775
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.772
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.760
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.739
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.729
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.721
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.715
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.707
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.699
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.669
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.666
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.659
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.658