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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1qw5 H4B Nitric oxide synthase, inducible 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.804
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.746
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.739
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.739
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.733
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.725
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.724
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.722
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.720
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.720
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.719
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.717
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.717
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.716
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.716
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.715
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.714
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.714
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.707
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.707
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.705
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.705
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.705
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.705
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.705
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.704
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.704
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.703
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.703
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.703
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.703
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.703
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.702
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.702
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.702
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.702
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.701
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.701
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.700
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.700
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.700
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.700
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.700
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.700
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.699
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.699
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.698
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.697
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.697
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.697
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.692
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.690
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.689
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.679
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.678
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.678
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.676
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.676
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.675
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.675
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.673
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.672
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.669
1m9t H4BNitric oxide synthase, inducible 1.14.13.39 0.661
4e5f 0N7Polymerase acidic protein / 0.660
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.655
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.652
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.650