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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1oz1 FPH Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1oz1 FPHMitogen-activated protein kinase 14 / 0.976
1ywr LI9Mitogen-activated protein kinase 14 / 0.750
2ewa SB2Mitogen-activated protein kinase 14 / 0.750
3hvc GG5Mitogen-activated protein kinase 14 / 0.747
3zs5 SB2Mitogen-activated protein kinase 14 / 0.743
3fmh 533Mitogen-activated protein kinase 14 / 0.706
3huc G97Mitogen-activated protein kinase 14 / 0.697
4loo SB4Mitogen-activated protein kinase 14 / 0.691
1bmk SB5Mitogen-activated protein kinase 14 / 0.684
1bl7 SB4Mitogen-activated protein kinase 14 / 0.680
4lop SB4Mitogen-activated protein kinase 14 / 0.678
3fml FMLMitogen-activated protein kinase 14 / 0.675
3flq 891Mitogen-activated protein kinase 14 / 0.670
3gcp SB2Mitogen-activated protein kinase 14 / 0.655