sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1osv | CHC | Bile acid receptor |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1osv | CHC | Bile acid receptor | / | 1.469 | |
| 1ot7 | CHC | Bile acid receptor | / | 1.219 | |
| 1xu7 | CPS | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.796 | |
| 3s79 | ASD | Aromatase | 1.14.14.14 | 0.695 | |
| 1o1v | TCH | Gastrotropin | / | 0.694 | |
| 3uzz | ASD | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.694 | |
| 2b04 | CHO | Phospholipase A2, major isoenzyme | 3.1.1.4 | 0.686 | |
| 3uzx | AOX | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.681 | |
| 4oez | DHT | Androgen receptor | / | 0.680 | |
| 2pip | DHT | Androgen receptor | / | 0.676 | |
| 1tw4 | CHD | Fatty acid-binding protein, liver | / | 0.667 | |
| 2ylp | TES | Androgen receptor | / | 0.667 | |
| 3uzx | AOM | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.666 | |
| 4ple | CPS | Nuclear receptor subfamily 5 group A member 2 | / | 0.665 | |
| 1t74 | DHT | Androgen receptor | / | 0.663 | |
| 4czt | CPS | CBL-interacting serine/threonine-protein kinase 23 | 2.7.11.1 | 0.663 | |
| 2b00 | GCH | Phospholipase A2, major isoenzyme | 3.1.1.4 | 0.662 | |
| 2pkl | DHT | Androgen receptor | / | 0.662 | |
| 4f4d | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.658 | |
| 4oea | DHT | Androgen receptor | / | 0.657 | |
| 2pix | DHT | Androgen receptor | / | 0.654 |