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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1oq5 CEL Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.976
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.825
1okm SABCarbonic anhydrase 2 4.2.1.1 0.808
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.802
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.802
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.801
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.799
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.796
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.795
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.792
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.791
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.789
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.780
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.776
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.775
3mho J43Carbonic anhydrase 2 4.2.1.1 0.771
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.771
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.768
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.764
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.761
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.760
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.759
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.758
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.758
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.756
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.755
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.754
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.752
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.752
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.749
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.748
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.745
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.744
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.743
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.742
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.742
1okn STBCarbonic anhydrase 2 4.2.1.1 0.741
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.740
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.736
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.736
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.726
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.725
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.723
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.720
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.718
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.718
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.713
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.713
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.713
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.713
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.711
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.711
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.710
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.710
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.709
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.708
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.704
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.704
3myq E27Carbonic anhydrase 2 4.2.1.1 0.704
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.704
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.701
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.701
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.700
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.700
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.699
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.698
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.697
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.697
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.695
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.695
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.694
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.694
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.692
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.689
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.688
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.688
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.688
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.688
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.687
1a42 BZUCarbonic anhydrase 2 4.2.1.1 0.685
4uov AZMCarbonate dehydratase / 0.684
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.683
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.683
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.683
4xiw AZMCarbonic anhydrase, alpha type / 0.683
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.681
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.678
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.678
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.677
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.674
3sax E50Carbonic anhydrase 2 4.2.1.1 0.673
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.671
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.669
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.668
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.665
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.665
3m98 E02Carbonic anhydrase 2 4.2.1.1 0.665
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.664
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.662
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.661
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.660
3da2 4MDCarbonic anhydrase 13 4.2.1.1 0.657
3f7u AG4Carbonic anhydrase 4 4.2.1.1 0.657
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.655
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.654
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.652
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.651
3hku TORCarbonic anhydrase 2 4.2.1.1 0.650