Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1ndz | FR5 | Adenosine deaminase | 3.5.4.4 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 1ndz | FR5 | Adenosine deaminase | 3.5.4.4 | 1.191 | |
| 1uml | FR4 | Adenosine deaminase | 3.5.4.4 | 0.814 | |
| 1qxl | FR8 | Adenosine deaminase | 3.5.4.4 | 0.802 | |
| 1ndy | FR3 | Adenosine deaminase | 3.5.4.4 | 0.794 | |
| 1o5r | FR9 | Adenosine deaminase | 3.5.4.4 | 0.774 | |
| 1v79 | FR7 | Adenosine deaminase | 3.5.4.4 | 0.758 |