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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1mmv H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.918
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.912
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.911
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.911
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.910
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.910
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.909
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.907
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.907
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.906
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.906
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.905
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.903
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.893
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.893
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.893
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.893
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.893
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.893
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.892
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.892
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.892
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.892
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.892
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.891
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.891
3png H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.891
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.891
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.890
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.889
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.888
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.888
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.883
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.881
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.878
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.876
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.875
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.875
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.874
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.872
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.872
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.872
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.872
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.871
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.862
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.862
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.855
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.854
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.854
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.852
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.850
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.847
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.839
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.836
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.832
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.830
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.828
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.827
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.826
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.825
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.825
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.824
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.815
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.806
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.800
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.797
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.797
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.788
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.785
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.782
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.767
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.759
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.759
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.754
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.752
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.739
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.739
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.735
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.730
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.722
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.715
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.705
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.701
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.693
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.664
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.660
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.658
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.652
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.651