scPDB - Distribution of Binding mode Similarity values of 1lmc entry / Site 1

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1lmc	BUL	Lysozyme C II	3.2.1.17

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
1lmc	BUL	Lysozyme C II	3.2.1.17	1.150
4p0g	BLG	Membrane-bound lytic murein transglycosylase F	/	0.710
1d0m	BLG	Membrane-bound lytic murein transglycosylase B	4.2.2.n1	0.684
1d0l	BLG	Membrane-bound lytic murein transglycosylase B	4.2.2.n1	0.653