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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1lhv NOG Sex hormone-binding globulin

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1lhv NOGSex hormone-binding globulin / 1.110
1kdk DHTSex hormone-binding globulin / 0.907
1d2s DHTSex hormone-binding globulin / 0.898
1f5f DHTSex hormone-binding globulin / 0.838
1kdm DHTSex hormone-binding globulin / 0.811
4e5l DBHPolymerase acidic protein / 0.704
3cas ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.702
2aa6 STRMineralocorticoid receptor / 0.681
4j6d TESCytochrome P450 monooxygenase / 0.671
1y9r 1CAMineralocorticoid receptor / 0.666
3w5p 4OAVitamin D3 receptor / 0.666
4hlw TESAndrogen receptor / 0.666
2mm3 CHOGastrotropin / 0.665
3s79 ASDAromatase 1.14.14.14 0.661
4nky 3QZSteroid 17-alpha-hydroxylase/17,20 lyase / 0.659
1fdt ESTEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.658
1lhu ESTSex hormone-binding globulin / 0.658
2q7i TESAndrogen receptor / 0.658
3eqm ASDAromatase 1.14.14.14 0.658
3fzw EQUSteroid Delta-isomerase 5.3.3.1 0.655