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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1if8 SBS Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.891
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.803
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.792
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.787
1okm SABCarbonic anhydrase 2 4.2.1.1 0.786
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.785
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.780
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.767
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.764
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.762
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.757
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.756
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.756
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.755
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.755
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.753
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.751
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.751
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.751
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.751
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.751
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.750
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.747
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.744
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.740
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.739
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.738
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.738
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.738
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.737
3mho J43Carbonic anhydrase 2 4.2.1.1 0.737
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.737
1okn STBCarbonic anhydrase 2 4.2.1.1 0.736
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.736
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.736
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.733
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.732
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.727
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.726
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.725
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.725
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.724
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.724
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.723
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.722
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.721
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.719
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.719
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.718
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.715
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.714
4uov AZMCarbonate dehydratase / 0.713
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.712
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.711
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.709
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.707
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.706
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.706
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.706
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.705
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.702
4xiw AZMCarbonic anhydrase, alpha type / 0.702
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.701
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.699
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.697
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.697
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.696
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.696
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.696
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.695
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.695
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.695
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.694
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.694
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.694
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.693
3da2 4MDCarbonic anhydrase 13 4.2.1.1 0.693
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.692
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.688
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.687
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.687
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.686
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.685
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.684
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.680
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.680
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.676
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.674
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.673
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.668
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.668
3sax E50Carbonic anhydrase 2 4.2.1.1 0.667
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.666
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.663
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.658
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.657
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.653
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.653