scPDB - Distribution of Binding mode Similarity values of 1i7l entry / Site 1

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1i7l	ATP	Synapsin-2

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
1i7l	ATP	Synapsin-2	/	1.208
4wso	NAD	Probable nicotinate-nucleotide adenylyltransferase	/	0.718
3a5m	ATP	Major actin	/	0.675
3a5o	ATP	Major actin	/	0.668
1nmd	ATP	Major actin	/	0.664
1yxq	ATP	Actin, alpha skeletal muscle	/	0.658
5cns	DAT	Ribonucleoside-diphosphate reductase 1 subunit alpha	1.17.4.1	0.657
1v25	ANP	Long-chain-fatty-acid--CoA ligase	6.2.1.3	0.653
2p9k	ATP	Actin-related protein 2	/	0.653
3orm	AGS	Serine/threonine protein kinase	/	0.653
5bn3	ADP	V-type ATP synthase alpha chain	/	0.651
5bn3	ADP	NEQ263	/	0.651