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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1gs4 ZK5 Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1gs4 ZK5Androgen receptor / 1.095
2piv DHTAndrogen receptor / 0.853
2q7l TESAndrogen receptor / 0.852
2ylq TESAndrogen receptor / 0.852
2ylo TESAndrogen receptor / 0.846
1t7m DHTAndrogen receptor / 0.828
1t7t DHTAndrogen receptor / 0.826
1t7f DHTAndrogen receptor / 0.825
2qpy DHTAndrogen receptor / 0.825
2yhd TESAndrogen receptor / 0.822
1t76 DHTAndrogen receptor / 0.821
4oey DHTAndrogen receptor / 0.813
1t7r DHTAndrogen receptor / 0.812
3zqt TESAndrogen receptor / 0.811
4k7a DHTAndrogen receptor / 0.806
2z4j DHTAndrogen receptor / 0.804
2q7j TESAndrogen receptor / 0.803
4oed DHTAndrogen receptor / 0.800
2am9 TESAndrogen receptor / 0.797
1t74 DHTAndrogen receptor / 0.795
1t79 DHTAndrogen receptor / 0.792
2pip DHTAndrogen receptor / 0.791
1t63 DHTAndrogen receptor / 0.790
2ylp TESAndrogen receptor / 0.790
1t73 DHTAndrogen receptor / 0.787
2ama DHTAndrogen receptor / 0.776
2q7k TESAndrogen receptor / 0.772
1t65 DHTAndrogen receptor / 0.771
4oea DHTAndrogen receptor / 0.764
2pit DHTAndrogen receptor / 0.757
2aa7 1CAMineralocorticoid receptor / 0.755
2aax PDNMineralocorticoid receptor / 0.755
2pio DHTAndrogen receptor / 0.749
2piw DHTAndrogen receptor / 0.743
4oez DHTAndrogen receptor / 0.740
1t5z DHTAndrogen receptor / 0.739
1xow R18Androgen receptor / 0.738
2ao6 R18Androgen receptor / 0.738
1y9r 1CAMineralocorticoid receptor / 0.719
1xj7 DHTAndrogen receptor / 0.717
2pnu ENMAndrogen receptor / 0.714
2ab2 SNLMineralocorticoid receptor / 0.707
4hlw TESAndrogen receptor / 0.707
2pkl DHTAndrogen receptor / 0.704
2abi 1CAMineralocorticoid receptor / 0.703
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.684
2aa2 AS4Mineralocorticoid receptor / 0.684
4udc DEXGlucocorticoid receptor / 0.681
3mne DEXGlucocorticoid receptor / 0.680
4q0a 4OAVitamin D3 receptor A / 0.680
3w5t LHPVitamin D3 receptor / 0.675
4apu A2KProgesterone receptor / 0.669
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.668
4at2 ASDPossible succinate dehydrogenase / 0.668
2oax SNLMineralocorticoid receptor / 0.666
3w5p 4OAVitamin D3 receptor / 0.663
2jn3 JN3Fatty acid-binding protein, liver / 0.661
4a2j AS0Progesterone receptor / 0.661
3w5r LOAVitamin D3 receptor / 0.660
2w8y NDRProgesterone receptor / 0.655
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.650
2cbo TH2Neocarzinostatin / 0.650
2rlc CHDCholoylglycine hydrolase 3.5.1.24 0.650