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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1g4j FFB Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.903
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.821
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.817
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.804
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.795
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.785
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.784
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.779
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.774
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.765
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.764
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.764
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.763
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.756
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.753
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.751
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.750
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.750
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.749
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.747
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3mho J43Carbonic anhydrase 2 4.2.1.1 0.744
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.742
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.741
1okm SABCarbonic anhydrase 2 4.2.1.1 0.741
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.738
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.736
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.735
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.734
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.731
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.731
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.730
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.729
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.729
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.728
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.728
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.724
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.724
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.723
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.723
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.722
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.721
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.720
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.720
4uov AZMCarbonate dehydratase / 0.719
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.713
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.713
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.713
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.713
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.713
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.712
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.708
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.708
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.708
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.707
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.707
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.707
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.707
4xiw AZMCarbonic anhydrase, alpha type / 0.706
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.703
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.703
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.701
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.701
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.701
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.701
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.699
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.699
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.698
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.698
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.698
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.697
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.696
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.696
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.696
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.695
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.695
3myq E27Carbonic anhydrase 2 4.2.1.1 0.694
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.693
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.692
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.688
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.686
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.684
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.684
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.679
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.679
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.678
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.672
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.671
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.669
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.666
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.665
3oim VZ5Carbonic anhydrase 2 4.2.1.1 0.662
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.660
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.656
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.654
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.651