Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1e1c | DCA | Methylmalonyl-CoA mutase large subunit | 5.4.99.2 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
1e1c | DCA | Methylmalonyl-CoA mutase large subunit | 5.4.99.2 | 1.256 | |
6req | 3CP | Methylmalonyl-CoA mutase large subunit | 5.4.99.2 | 1.163 | |
1req | DCA | Methylmalonyl-CoA mutase large subunit | 5.4.99.2 | 1.079 | |
7req | 2CP | Methylmalonyl-CoA mutase large subunit | 5.4.99.2 | 1.051 |