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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1dwx H4B Nitric oxide synthase, inducible 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.785
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.751
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.746
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.744
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.743
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.743
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.742
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.740
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.739
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.739
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.739
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.739
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.738
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.736
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.731
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.730
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.728
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.728
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.728
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.727
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.727
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.726
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.726
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.725
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.725
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.725
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.724
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.724
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.724
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.724
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.724
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.723
3png H4BNitric oxide synthase, brain 1.14.13.39 0.723
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.723
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.723
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.722
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.722
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.722
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.721
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.721
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.721
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.719
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.719
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.718
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.717
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.717
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.717
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.713
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.708
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.708
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.708
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.707
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.707
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.706
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.706
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.706
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.705
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.705
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.705
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.705
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.704
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.704
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.704
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.703
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.703
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.703
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.702
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.702
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.702
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.702
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.702
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.702
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.702
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.702
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.701
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.701
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.700
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.699
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.699
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.698
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.695
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.693
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.693
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.692
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.692
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.691
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.691
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.690
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.690
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.690
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.689
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.689
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.689
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.688
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.686
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.685
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.685
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.684
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.683
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.682
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.681
2nod H4BNitric oxide synthase, inducible 1.14.13.39 0.675
1m9t H4BNitric oxide synthase, inducible 1.14.13.39 0.674
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.673
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.671
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.669
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.668
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.668
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.667
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.666
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.666
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.662
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.661
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.661
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.661
4e5f 0N7Polymerase acidic protein / 0.660
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.659
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.656
4blt APCNTPase P4 / 0.656
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.655
3w6h AZMCarbonic anhydrase 1 4.2.1.1 0.654
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.653