scPDB - Distribution of Binding mode Similarity values of 1be4 entry / Site 1

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1be4	PCG	Nucleoside diphosphate kinase A 2	2.7.4.6

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
1be4	PCG	Nucleoside diphosphate kinase A 2	2.7.4.6	0.841
2dxf	GNP	Nucleoside diphosphate kinase	2.7.4.6	0.691
2dxe	GDP	Nucleoside diphosphate kinase	2.7.4.6	0.681
3bbf	GDP	Nucleoside diphosphate kinase B	2.7.4.6	0.668
4uoh	ADP	Nucleoside diphosphate kinase	/	0.650